Evidence map›Paper›PMID 27130170›Full record

ArticleBehavior research methods2017

SwarmSight: Measuring the temporal progression of animal group activity levels from natural-scene and laboratory videos.

Justas Birgiolas, Christopher M Jernigan, Brian H Smith, Sharon M Crook

Abstract read
In one paragraph

Article in Behavior research methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Justas BirgiolasSchool of Life Sciences, Arizona State University, P.O. Box 874601, Tempe, AZ, 85287-4601, USA. justas@asu.edu.
Christopher M JerniganSchool of Life Sciences, Arizona State University, P.O. Box 874601, Tempe, AZ, 85287-4601, USA.
Brian H SmithSchool of Life Sciences, Arizona State University, P.O. Box 874601, Tempe, AZ, 85287-4601, USA.
Sharon M CrookSchool of Life Sciences, Arizona State University, P.O. Box 874601, Tempe, AZ, 85287-4601, USA.

Funding

Multiscale model of exploration-exploitation tradeoff: from genes to collectivesR01GM113967 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI SMITH, BRIAN H. · 2015 to 2018
$1.9M
Tools for Model Discovery, Validation and Selection in Neuroscience with NeuroMLR01MH106674 · NIMH · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI CROOK, SHARON MARIE · 2015 to 2018
$1.6M
CRCNS: Importance of temporal information for olfactory codesR01DC007997 · NIDCD · OHIO STATE UNIVERSITY · PI TERMAN, DAVID H · 2005 to 2007
$843k
NIDCD NIH HHS R01 DC007997NIGMS NIH HHS R01 GM113967NIMH NIH HHS R01 MH106674
6 · The paper itself

Abstract

We describe SwarmSight (available at https://github.com/justasb/SwarmSight ), a novel, open-source, Microsoft Windows software tool for quantitative assessment of the temporal progression of animal group activity levels from recorded videos. The tool utilizes a background subtraction machine vision algorithm and provides an activity metric that can be used to quantitatively assess and compare animal group behavior. Here we demonstrate the tool's utility by analyzing defensive bee behavior as modulated by alarm pheromones, wild-bird feeding onset and interruption, and cockroach nest-finding activity. Although more sophisticated, commercial software packages are available, SwarmSight provides a low-cost, open-source, and easy-to-use alternative that is suitable for a wide range of users, including minimally trained research technicians and behavioral science undergraduate students in classroom laboratory settings.

Indexed as

Behavior, AnimalSoftwareAlgorithmsAnimalsTime FactorsVideo RecordingActivity changeActivity detectionActivity levelsAutomated behavior assessmentBeesBirdsCockroachesGroup activityInsectsMotion detectionNatural scenesSoftwareSwarmSightVideo motion analysis

Identifiers

PMID27130170
PMCPMC5086309

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.