Evidence map›Paper›PMID 27130157›Full record

ArticleThe Biochemical journal2016

EssC: domain structures inform on the elusive translocation channel in the Type VII secretion system.

Martin Zoltner, Wui M A V Ng, Jillian J Money, Paul K Fyfe, Holger Kneuper, Tracy Palmer, William N Hunter

Abstract read
In one paragraph

Article in The Biochemical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. New insights into the domain of unknown function (DUF) of EccCActa crystallographica. Section D, Structural biology · 2024
    Article
  7. Structure of a tripartite protein complex that targets toxins to the type VII secretion system.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. A novel variant of theMicrobial genomics · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. The Type VII Secretion System ofAnnual review of microbiology · 2021
    Article
  17. Review
  18. Article
  19. Article
  20. A membrane-depolarizing toxin substrate of theProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Martin ZoltnerSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
Wui M A V NgSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
Jillian J MoneySchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
Paul K FyfeSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
Holger KneuperSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
Tracy PalmerSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K.
William N HunterSchool of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, U.K. w.n.hunter@dundee.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/0000A189Biotechnology and Biological Sciences Research Council H007571Medical Research Council G117/519Medical Research Council MR/M011224/1Wellcome Trust 082596Wellcome Trust 094090
6 · The paper itself

Abstract

The membrane-bound protein EssC is an integral component of the bacterial Type VII secretion system (T7SS), which is a determinant of virulence in important Gram-positive pathogens. The protein is predicted to consist of an intracellular repeat of forkhead-associated (FHA) domains at the N-terminus, two transmembrane helices and three P-loop-containing ATPase-type domains, D1-D3, forming the C-terminal intracellular segment. We present crystal structures of the N-terminal FHA domains (EssC-N) and a C-terminal fragment EssC-C from Geobacillus thermodenitrificans, encompassing two of the ATPase-type modules, D2 and D3. Module D2 binds ATP with high affinity whereas D3 does not. The EssC-N and EssC-C constructs are monomeric in solution, but the full-length recombinant protein, with a molecular mass of approximately 169 kDa, forms a multimer of approximately 1 MDa. The observation of protomer contacts in the crystal structure of EssC-C together with similarity to the DNA translocase FtsK, suggests a model for a hexameric EssC assembly. Such an observation potentially identifies the key, and to date elusive, component of pore formation required for secretion by this recently discovered secretion system. The juxtaposition of the FHA domains suggests potential for interacting with other components of the secretion system. The structural data were used to guide an analysis of which domains are required for the T7SS machine to function in pathogenic Staphylococcus aureus The extreme C-terminal ATPase domain appears to be essential for EssC activity as a key part of the T7SS, whereas D2 and FHA domains are required for the production of a stable and functional protein.

Indexed as

Bacterial ProteinsProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryRecombinant ProteinsStaphylococcus aureusType VII Secretion SystemsBacterial ProteinsRecombinant ProteinsType VII Secretion SystemsATPaseESX-1forkhead-associated domainmembrane-bound proteinP-loop-containing domainsecretion system

Identifiers

PMID27130157
PMCPMC4925161

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.