Evidence map›Paper›PMID 27129962›Full record

ArticleApplied and environmental microbiology2016

Development of an Avirulent Salmonella Surrogate for Modeling Pathogen Behavior in Pre- and Postharvest Environments.

Marcos H de Moraes, Travis K Chapin, Amber Ginn, Anita C Wright, Kenneth Parker, Carol Hoffman, David W Pascual, Michelle D Danyluk, Max Teplitski

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marcos H de MoraesSoil and Water Science Department, Genetics Institute, University of Florida Institute of Food and Agricultural Sciences (UF/IFAS), Gainesville, Florida, USA.
Travis K ChapinDepartment of Food Science and Human Nutrition, Citrus Research and Education Center, UF/IFAS, Lake Alfred, Florida, USA.
Amber GinnDepartment of Food Science and Human Nutrition, UF/IFAS, Gainesville, Florida, USA.
Anita C WrightDepartment of Food Science and Human Nutrition, UF/IFAS, Gainesville, Florida, USA.
Kenneth ParkerSoil and Water Science Department, Genetics Institute, University of Florida Institute of Food and Agricultural Sciences (UF/IFAS), Gainesville, Florida, USA.
Carol HoffmanDepartment of Infectious Diseases and Pathology, University of Florida, Gainesville, Florida, USA.
David W PascualDepartment of Infectious Diseases and Pathology, University of Florida, Gainesville, Florida, USA.
Michelle D DanylukDepartment of Food Science and Human Nutrition, Citrus Research and Education Center, UF/IFAS, Lake Alfred, Florida, USA.
Max TeplitskiSoil and Water Science Department, Genetics Institute, University of Florida Institute of Food and Agricultural Sciences (UF/IFAS), Gainesville, Florida, USA maxtep@ufl.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledRecurrent outbreaks of bacterial gastroenteritis linked to the consumption of fresh fruits and vegetables highlight the paucity of understanding of the ecology of Salmonella enterica under crop production and postharvest conditions. These gaps in knowledge are due, at least in part, to the lack of suitable surrogate organisms for studies for which biosafety level 2 is problematic. Therefore, we constructed and validated an avirulent strain of Salmonella enterica serovar Typhimurium. The strain lacks major Salmonella pathogenicity islands SPI-1, SPI-2, SPI-3, SPI-4, and SPI-5 as well as the virulence plasmid pSLT. Deletions and the absence of genomic rearrangements were confirmed by genomic sequencing, and the surrogate behaved like the parental wild-type strain on selective media. A loss-of-function (phoN) selective marker allowed the differentiation of this strain from wild-type strains on a medium containing a chromogenic substrate for alkaline phosphatase. Lack of virulence was confirmed by oral infection of female BALB/c mice. The strain persisted in tomatoes, cantaloupes, leafy greens, and soil with the same kinetics as the parental wild-type and selected outbreak strains, and it reached similar final population levels. The responses of this strain to heat treatment and disinfectants were similar to those of the wild type, supporting its potential as a surrogate for future studies on the ecology and survival of Salmonella in production and processing environments. IMPORTANCE: There is significant interest in understanding the ecology of human pathogens in environments outside of their animal hosts, including the crop production environment. However, manipulative field experiments with virulent human pathogens are unlikely to receive regulatory approval due to the obvious risks. Therefore, we constructed an avirulent strain of S. enterica serovar Typhimurium and characterized it extensively.

Indexed as

AnimalsDisease Models, AnimalFood MicrobiologyFruitGenomic IslandsMice, Inbred BALB CSalmonella InfectionsSalmonella typhimuriumSequence DeletionSoil MicrobiologyVegetablesVirulence

Identifiers

PMID27129962
PMCPMC4959206

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.