Evidence map›Paper›PMID 27129950›Full record

ArticleJournal of experimental botany2016

Large variation in the Rubisco kinetics of diatoms reveals diversity among their carbon-concentrating mechanisms.

Jodi N Young, Ana M C Heureux, Robert E Sharwood, Rosalind E M Rickaby, François M M Morel, Spencer M Whitney

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
23.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 203 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Rewinding evolution in planta: A Rubisco-null platform validates high-performance ancestral enzymes.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Jodi N YoungDepartment of Geosciences, Princeton University, Princeton, NJ 08544, USA youngjn@uw.edu.
Ana M C HeureuxDepartment of Earth Sciences, University of Oxford, South Parks Road, Oxford OX1 3AN, UK.
Robert E SharwoodPlant Science Division, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia.
Rosalind E M RickabyDepartment of Earth Sciences, University of Oxford, South Parks Road, Oxford OX1 3AN, UK.
François M M MorelDepartment of Geosciences, Princeton University, Princeton, NJ 08544, USA.
Spencer M WhitneyPlant Science Division, Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia.
Australian National University · AUPrinceton University · USUniversity of Oxford · GB

Funding

European Research Council 200915
6 · The paper itself

Abstract

While marine phytoplankton rival plants in their contribution to global primary productivity, our understanding of their photosynthesis remains rudimentary. In particular, the kinetic diversity of the CO2-fixing enzyme, Rubisco, in phytoplankton remains unknown. Here we quantify the maximum rates of carboxylation (k cat (c)), oxygenation (k cat (o)), Michaelis constants (K m) for CO2 (K C) and O2 (K O), and specificity for CO2 over O2 (SC/O) for Form I Rubisco from 11 diatom species. Diatom Rubisco shows greater variation in K C (23-68 µM), SC/O (57-116mol mol(-1)), and K O (413-2032 µM) relative to plant and algal Rubisco. The broad range of K C values mostly exceed those of C4 plant Rubisco, suggesting that the strength of the carbon-concentrating mechanism (CCM) in diatoms is more diverse, and more effective than previously predicted. The measured k cat (c) for each diatom Rubisco showed less variation (2.1-3.7s(-1)), thus averting the canonical trade-off typically observed between K C and k cat (c) for plant Form I Rubisco. Uniquely, a negative relationship between K C and cellular Rubisco content was found, suggesting variation among diatom species in how they allocate their limited cellular resources between Rubisco synthesis and their CCM. The activation status of Rubisco in each diatom was low, indicating a requirement for Rubisco activase. This work highlights the need to better understand the correlative natural diversity between the Rubisco kinetics and CCM of diatoms and the underpinning mechanistic differences in catalytic chemistry among the Form I Rubisco superfamily.

Indexed as

CarbonDiatomsKineticsPhotosynthesisPhytoplanktonRibulose-Bisphosphate CarboxylaseCarbonRibulose-Bisphosphate CarboxylaseAlgaecarbon fixationdiatomskineticsphotosynthesisRubisco.

Identifiers

PMID27129950
PMCPMC4892730
OpenAlexW2344478091

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.