Evidence map›Paper›PMID 27129217›Full record

ArticleThe Journal of biological chemistry2016

The Dimeric Architecture of Checkpoint Kinases Mec1ATR and Tel1ATM Reveal a Common Structural Organization.

Marta Sawicka, Paulina H Wanrooij, Vidya C Darbari, Elias Tannous, Sarem Hailemariam, Daniel Bose, Alena V Makarova, Peter M Burgers, Xiaodong Zhang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. A DNA damage-induced phosphorylation circuit enhances Mec1Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Review
  9. Novel insights into the mechanism of cell cycle kinases Mec1(ATR) and Tel1(ATM).Critical reviews in biochemistry and molecular biology · 2021
    Article
  10. Molecular basis of human ATM kinase inhibition.Nature structural & molecular biology · 2021
    Article
  11. Mechanism of auto-inhibition and activation of Mec1Nature structural & molecular biology · 2021
    Article
  12. Cryo-EM Structure of Nucleotide-Bound Tel1Structure (London, England : 1993) · 2020
    Article
  13. Structural basis of homologous recombination.Cellular and molecular life sciences : CMLS · 2020
    Review
  14. Mec1Cell reports · 2019
    Article
  15. Activation of Tel1The Journal of biological chemistry · 2019
    Article
  16. Article
  17. Establishment of the early cilia preassembly protein complex during motile ciliogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  18. Article
  19. Breaking up with ATM.Journal of immunological sciences · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Marta SawickaFrom the Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington, London SW7 2AZ, United Kingdom and.
Paulina H Wanrooijthe Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
Vidya C DarbariFrom the Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington, London SW7 2AZ, United Kingdom and.
Elias Tannousthe Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
Sarem Hailemariamthe Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
Daniel BoseFrom the Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington, London SW7 2AZ, United Kingdom and.
Alena V Makarovathe Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
Peter M Burgersthe Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110 burgers@biochem.wustl.edu.
Xiaodong ZhangFrom the Section of Structural Biology, Department of Medicine, Imperial College London, South Kensington, London SW7 2AZ, United Kingdom and xiaodong.zhang@imperial.ac.uk.
Washington University in St. Louis · USImperial College London · GB

Funding

MECHANISMS OF DNA REPLICATION AND MAINTENANCE IN EUKARYOTESR35GM118129 · NIGMS · WASHINGTON UNIVERSITY · PI BURGERS, PETER M · 2016 to 2025
$6.7M
KINASE ACTIVATION IN THE DNA DAMAGE CHECKPOINTSR01GM083970 · NIGMS · WASHINGTON UNIVERSITY · PI BURGERS, PETER M · 2009 to 2016
$2.1M
Biotechnology and Biological Sciences Research Council BB/H012249/1Medical Research Council MR/J001201/1Medical Research Council MR/N006828/1NIGMS NIH HHS R01 GM083970NIGMS NIH HHS R35 GM118129
6 · The paper itself

Abstract

The phosphatidylinositol 3-kinase-related protein kinases are key regulators controlling a wide range of cellular events. The yeast Tel1 and Mec1·Ddc2 complex (ATM and ATR-ATRIP in humans) play pivotal roles in DNA replication, DNA damage signaling, and repair. Here, we present the first structural insight for dimers of Mec1·Ddc2 and Tel1 using single-particle electron microscopy. Both kinases reveal a head to head dimer with one major dimeric interface through the N-terminal HEAT (named after Huntingtin, elongation factor 3, protein phosphatase 2A, and yeast kinase TOR1) repeat. Their dimeric interface is significantly distinct from the interface of mTOR complex 1 dimer, which oligomerizes through two spatially separate interfaces. We also observe different structural organizations of kinase domains of Mec1 and Tel1. The kinase domains in the Mec1·Ddc2 dimer are located in close proximity to each other. However, in the Tel1 dimer they are fully separated, providing potential access of substrates to this kinase, even in its dimeric form.

Indexed as

Protein MultimerizationAtaxia Telangiectasia Mutated ProteinsHumansProtein DomainsProtein Structure, QuaternaryStructural Homology, ProteinAtaxia Telangiectasia Mutated ProteinsATM protein, humanATR protein, humancheckpoint controlDNA damage responsenucleic acid enzymologyphosphatidylinositol kinase (PI Kinase)protein structureserine/threonine protein kinase

Identifiers

PMID27129217
PMCPMC4919432
OpenAlexW2342718470

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.