Evidence map›Paper›PMID 27129174›Full record

ArticleOncotarget2016

Validation of DAB2IP methylation and its relative significance in predicting outcome in renal cell carcinoma.

Zong-Ren Wang, Jin-Huan Wei, Jian-Cheng Zhou, Ahmed Haddad, Liang-Yun Zhao, Payal Kapur, Kai-Jie Wu, Bin Wang, Yan-Hong Yu, Bing Liao and 5 more

Open access · diamondAbstract readMulticenter Study
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Downregulation of Human DAB2IP Gene Expression in Renal Cell Carcinoma Results in Resistance to Ionizing Radiation.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Article
  9. Article
  10. The Role of DNA Methylation in Renal Cell Carcinoma.Molecular diagnosis & therapy · 2018
    Review
  11. Article
  12. The Clinical Signification of Claudin-11 Promoter Hypermethylation for Laryngeal Squamous Cell Carcinoma.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
  13. Aberrant Promoter Methylation of PCDH17 (Protocadherin 17) in Serum and its Clinical Significance in Renal Cell Carcinoma.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Zong-Ren WangDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangdong, China.
Jin-Huan WeiDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangdong, China.
Jian-Cheng ZhouDepartment of Urology, Shaanxi Provincial People's Hospital, Shaanxi, China.
Ahmed HaddadDepartment of Urology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.
Liang-Yun ZhaoDepartment of Urology, Affiliated Hospital of Kunming University of Science and Technology, Yunnan, China.
Payal KapurDepartment of Pathology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.
Kai-Jie WuDepartment of Urology, First Affiliated Hospital of Xi'an Jiaotong University, Shaanxi, China.
Bin WangDepartment of Urology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.
Yan-Hong YuDepartment of Urology, Affiliated Hospital of Kunming University of Science and Technology, Yunnan, China.
Bing LiaoDepartment of Pathology, First Affiliated Hospital, Sun Yat-sen University, Guangdong, China.
Da-Lin HeDepartment of Urology, First Affiliated Hospital of Xi'an Jiaotong University, Shaanxi, China.
Wei ChenDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangdong, China.
Vitaly MargulisDepartment of Urology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.
Jer-Tsong HsiehDepartment of Urology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX, USA.
Jun-Hang LuoDepartment of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangdong, China.
The University of Texas Southwestern Medical Center · USThe First Affiliated Hospital, Sun Yat-sen University · CNFirst Affiliated Hospital of Xi'an Jiaotong University · CNKunming University of Science and Technology · CNSun Yat-sen University · CNShaanxi Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have recently reported tumor suppressive role of DAB2IP in RCC development. In this study, We identified one CpG methylation biomarker (DAB2IP CpG1) located UTSS of DAB2IP that was associated with poor overall survival in a cohort of 318 ccRCC patients from the Cancer Genome Atlas (TCGA). We further validated the prognostic accuracy of DAB2IP CpG methylation by pyrosequencing quantitative methylation assay in 224 ccRCC patients from multiple Chinese centers (MCHC set), and 239 patients from University of Texas Southwestern Medical Center at Dallas (UTSW set) by using FFPE samples. DAB2IP CpG1 can predict the overall survival of patients in TCGA, MCHC, and UTSW sets independent of patient age, Fuhrman grade and TNM stage (all p<0.05). DAB2IP CpG1 successfully categorized patients into high-risk and low-risk groups with significant differences of clinical outcome in respective clinical subsets, regardless of age, sex, grade, stage, or race (HR: 1.63-7.83; all p<0.05). The detection of DAB2IP CpG1 methylation was minimally affected by ITH in ccRCC. DAB2IP mRNA expression was regulated by DNA methylation in vitro. DAB2IP CpG1 methylation is a practical and repeatable biomarker for ccRCC, which can provide prognostic value that complements the current staging system.

Indexed as

DNA MethylationBiomarkers, TumorCarcinoma, Renal CellCpG IslandsFemaleGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateKidney NeoplasmsMaleMiddle AgedMultivariate AnalysisNeoplasm GradingNeoplasm StagingPrognosisras GTPase-Activating ProteinsBiomarkers, TumorDAB2IP protein, humanras GTPase-Activating ProteinsDAB2IPDNA methylationintratumour heterogeneityprognosisrenal cell carcinoma

Identifiers

PMID27129174
PMCPMC5058774
OpenAlexW2344119241

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.