Evidence map›Paper›PMID 27125486›Full record

ArticleGenome announcements2016

High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China.

Chrisabelle C Mefferd, En-Min Zhou, Tian-Tian Yu, Hong Ming, Senthil K Murugapiran, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese and 14 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Complete Genome Analysis ofFrontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Chrisabelle C MefferdSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA.
En-Min ZhouSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, China Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China.
Tian-Tian YuKey Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China.
Hong MingKey Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China.
Senthil K MurugapiranSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA.
Marcel HuntemannDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Alicia ClumDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Manoj PillayDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Krishnaveni PalaniappanDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Neha VargheseDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Natalia MikhailovaDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Dimitrios StamatisDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
T B K ReddyDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Chew Yee NganDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Chris DaumDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Kecia DuffyDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Nicole ShapiroDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Victor MarkowitzDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Natalia IvanovaDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Nikos KyrpidesDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Amanda J WilliamsSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA SWCA Environmental Consultants, Las Vegas, Nevada, USA.
Tanja WoykeDepartment of Energy Joint Genome Institute, Walnut Creek, California, USA.
Wen-Jun LiState Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, China Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China liwenjun@ms.xjb.ac.cn brian.hedlund@unlv.edu.
Brian P HedlundSchool of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, Nevada, USA liwenjun@ms.xjb.ac.cn brian.hedlund@unlv.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The draft genomes of Thermus  tengchongensis YIM 77401 and T. caliditerrae YIM 77777 are 2,562,314 and 2,218,114 bp and encode 2,726 and 2,305 predicted genes, respectively. Gene content and growth experiments demonstrate broad metabolic capacity, including starch hydrolysis, thiosulfate oxidation, arsenite oxidation, incomplete denitrification, and polysulfide reduction.

Identifiers

PMID27125486
PMCPMC4850857

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.