Evidence map›Paper›PMID 27125278›Full record

ArticleDisease models & mechanisms2016

Histone lysine crotonylation during acute kidney injury in mice.

Olga Ruiz-Andres, Maria Dolores Sanchez-Niño, Pablo Cannata-Ortiz, Marta Ruiz-Ortega, Jesus Egido, Alberto Ortiz, Ana Belen Sanz

Open access · goldAbstract read
In one paragraph

Article in Disease models & mechanisms, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed, 1 pooled it
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 1 synthesis or guideline pooled it, 160 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. The Landscape and Regulation of Histone Crotonylation in Mammalian Gametes and Early Embryos.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Epigenetic memories induced by hypoxia in AKI-to-CKD transition.Clinical and experimental nephrology · 2025
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Olga Ruiz-AndresNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain.
Maria Dolores Sanchez-NiñoNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain.
Pablo Cannata-OrtizPathology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain.
Marta Ruiz-OrtegaNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain IRSIN, Madrid 28003, Spain.
Jesus EgidoNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain IRSIN, Madrid 28003, Spain.
Alberto OrtizNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain IRSIN, Madrid 28003, Spain aortiz@fjd.es asanz@fjd.es.
Ana Belen SanzNephrology, IIS-Fundacion Jimenez Diaz, Madrid 28040, Spain School of Medicine, UAM, Madrid 28029, Spain REDinREN, Madrid 28040, Spain aortiz@fjd.es asanz@fjd.es.
Hospital Universitario Fundación Jiménez Díaz · ESSpanish Clinical Research Network · ESUniversidad Autónoma de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute kidney injury (AKI) is a potentially lethal condition for which no therapy is available beyond replacement of renal function. Post-translational histone modifications modulate gene expression and kidney injury. Histone crotonylation is a recently described post-translational modification. We hypothesized that histone crotonylation might modulate kidney injury. Histone crotonylation was studied in cultured murine proximal tubular cells and in kidneys from mice with AKI induced by folic acid or cisplatin. Histone lysine crotonylation was observed in tubular cells from healthy murine and human kidney tissue. Kidney tissue histone crotonylation increased during AKI. This was reproduced by exposure to the protein TWEAK in cultured tubular cells. Specifically, ChIP-seq revealed enrichment of histone crotonylation at the genes encoding the mitochondrial biogenesis regulator PGC-1α and the sirtuin-3 decrotonylase in both TWEAK-stimulated tubular cells and in AKI kidney tissue. To assess the role of crotonylation in kidney injury, crotonate was used to increase histone crotonylation in cultured tubular cells or in the kidneys in vivo Crotonate increased the expression of PGC-1α and sirtuin-3, and decreased CCL2 expression in cultured tubular cells and healthy kidneys. Systemic crotonate administration protected from experimental AKI, preventing the decrease in renal function and in kidney PGC-1α and sirtuin-3 levels as well as the increase in CCL2 expression. For the first time, we have identified factors such as cell stress and crotonate availability that increase histone crotonylation in vivo Overall, increasing histone crotonylation might have a beneficial effect on AKI. This is the first observation of the in vivo potential of the therapeutic manipulation of histone crotonylation in a disease state.

Indexed as

Acute Kidney InjuryAnimalsCells, CulturedChemokine CCL2CrotonatesCytokine TWEAKDown-RegulationEpithelial CellsHistonesKidney TubulesLysineMiceModels, BiologicalPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaRNA, MessengerSirtuin 3Chemokine CCL2CrotonatesCytokine TWEAKHistonesLysinePeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaRNA, MessengerSirtuin 3Tnfsf12 protein, mouseAcute kidney injuryEpigeneticsHistoneInflammationTubular cell

Identifiers

PMID27125278
PMCPMC4920150
OpenAlexW2405405928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.