Evidence map›Paper›PMID 27122315›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Eyespot-dependent determination of the phototactic sign in Chlamydomonas reinhardtii.

Noriko Ueki, Takahiro Ide, Shota Mochiji, Yuki Kobayashi, Ryutaro Tokutsu, Norikazu Ohnishi, Katsushi Yamaguchi, Shuji Shigenobu, Kan Tanaka, Jun Minagawa and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Heme-binding protein CYB5D1 couples intraflagellar redox to calcium signaling for coordinated flagellar beating.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Algal optics.Physical review. E · 2026
    Article
  6. Chlamylipo, aBiophysics and physicobiology · 2026
    Article
  7. Interactions Between Active Matters and Endogenous Fields.Advanced materials (Deerfield Beach, Fla.) · 2025
    Review
  8. Article
  9. Micro/Nano-Motors for Enhanced Tumor Diagnosis and Therapy.International journal of molecular sciences · 2025
    Review
  10. Review
  11. Intermediate light adaptation induces oscillatory phototaxis switching and pattern formation inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. mSphere · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Noriko UekiLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan; Department of Biological Sciences, Graduate School of Science and Engineering, Chuo University, Tokyo 112-8551, Japan;
Takahiro IdeLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan;
Shota MochijiDepartment of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo 113-0033, Japan;
Yuki KobayashiLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan;
Ryutaro TokutsuDivision of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan; Department of Basic Biology, Faculty of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki 444-8585, Japan; Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Chiyoda-Ku, Tokyo 102-0076, Japan;
Norikazu OhnishiDivision of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan;
Katsushi YamaguchiFunctional Genomics Facility, National Institute for Basic Biology, Okazaki 444-8585, Japan;
Shuji ShigenobuDepartment of Basic Biology, Faculty of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki 444-8585, Japan; Functional Genomics Facility, National Institute for Basic Biology, Okazaki 444-8585, Japan;
Kan TanakaLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan; Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Chiyoda-Ku, Tokyo 102-0076, Japan;
Jun MinagawaDivision of Environmental Photobiology, National Institute for Basic Biology, Okazaki 444-8585, Japan; Department of Basic Biology, Faculty of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki 444-8585, Japan; Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Chiyoda-Ku, Tokyo 102-0076, Japan;
Toru HisaboriLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan; Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Chiyoda-Ku, Tokyo 102-0076, Japan;
Masafumi HironoDepartment of Frontier Bioscience, Hosei University, Tokyo 184-8584, Japan.
Ken-Ichi WakabayashiLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan; wakaba@res.titech.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biflagellate green alga Chlamydomonas reinhardtii exhibits both positive and negative phototaxis to inhabit areas with proper light conditions. It has been shown that treatment of cells with reactive oxygen species (ROS) reagents biases the phototactic sign to positive, whereas that with ROS scavengers biases it to negative. Taking advantage of this property, we isolated a mutant, lts1-211, which displays a reduction-oxidation (redox) dependent phototactic sign opposite to that of the wild type. This mutant has a single amino acid substitution in phytoene synthase, an enzyme that functions in the carotenoid-biosynthesis pathway. The eyespot contains large amounts of carotenoids and is crucial for phototaxis. Most lts1-211 cells have no detectable eyespot and reduced carotenoid levels. Interestingly, the reversed phototactic-sign phenotype of lts1-211 is shared by other eyespot-less mutants. In addition, we directly showed that the cell body acts as a convex lens. The lens effect of the cell body condenses the light coming from the rear onto the photoreceptor in the absence of carotenoid layers, which can account for the reversed-phototactic-sign phenotype of the mutants. These results suggest that light-shielding property of the eyespot is essential for determination of phototactic sign.

Indexed as

AnimalsCarotenoidsCell MovementChlamydomonas reinhardtiiLightPhotoreceptor Cells, InvertebratePhototaxisPigmentationRadiation DosageCarotenoidscarotenoidsChlamydomonaseyespotlensphototaxis

Identifiers

PMID27122315
PMCPMC4868408

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.