Evidence map›Paper›PMID 27122151›Full record

ArticleJournal of molecular neuroscience : MN2016

Promoter-Specific Hypomethylation Correlates with IL-1β Overexpression in Tuberous Sclerosis Complex (TSC).

A Fuso, A M Iyer, J van Scheppingen, M Maccarrone, T Scholl, J A Hainfellner, M Feucht, F E Jansen, W G Spliet, P Krsek and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular neuroscience : MN, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

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  10. Prenatal Phenotypical Discrepancy in Monozygotic Twins with Tuberous Sclerosis Complex.Maternal-fetal medicine (Wolters Kluwer Health, Inc.) · 2022
    Article
  11. Article
  12. Review
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  16. Review
  17. Article
  18. Neuroinflammatory Nexus of Pediatric Epilepsy.Journal of pediatric epilepsy · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 4 countries.

A FusoEuropean Center for Brain Research (CERC)/IRCCS Santa Lucia Foundation, Via del Fosso di Fiorano 64-65, 00143, Rome, Italy.
A M IyerDepartment of (Neuro)Pathology, Academic Medical Center, University of Amsterdam, Meibergdreef 9, 1105 AZ, Amsterdam, The Netherlands.
J van ScheppingenDepartment of (Neuro)Pathology, Academic Medical Center, University of Amsterdam, Meibergdreef 9, 1105 AZ, Amsterdam, The Netherlands.
M MaccarroneEuropean Center for Brain Research (CERC)/IRCCS Santa Lucia Foundation, Via del Fosso di Fiorano 64-65, 00143, Rome, Italy.
T SchollDepartment of Pediatrics, Medical University Vienna, Vienna, Austria.
J A HainfellnerInstitute of Neurology, Medical University Vienna, Vienna, Austria.
M FeuchtDepartment of Pediatrics, Medical University Vienna, Vienna, Austria.
F E JansenDepartment of Pediatric Neurology, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, The Netherlands.
W G SplietDepartment of Pathology, University Medical Center Utrecht, Utrecht, The Netherlands.
P KrsekDepartment of Pediatric Neurology, 2nd Faculty of Medicine, Charles University, Motol University Hospital, Prague, Czech Republic.
J ZamecnikDepartment of Pathology, 2nd Faculty of Medicine, Charles University, Motol University Hospital, Prague, Czech Republic.
A MühlebnerDepartment of (Neuro)Pathology, Academic Medical Center, University of Amsterdam, Meibergdreef 9, 1105 AZ, Amsterdam, The Netherlands.
E AronicaDepartment of (Neuro)Pathology, Academic Medical Center, University of Amsterdam, Meibergdreef 9, 1105 AZ, Amsterdam, The Netherlands. e.aronica@amc.uva.nl.
Amsterdam UMC Location University of Amsterdam · NLCharles University · CZMedical University of Vienna · ATUniversity Medical Center Utrecht · NLEuropean Brain Research Institute · ITNetherlands Institute for Neuroscience · NLUniversità Campus Bio-Medico · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In tuberous sclerosis complex (TSC), overexpression of numerous genes associated with inflammation has been observed. Among different proinflammatory cytokines, interleukin-1β (IL-1β) has been shown to be significantly involved in epileptogenesis and maintenance of seizures. Recent evidence indicates that IL-1β gene expression can be regulated by DNA methylation of its promoter. In the present study, we hypothesized that hypomethylation in the promoter region of the IL-1β gene may underlie its overexpression observed in TSC brain tissue. Bisulfite sequencing was used to study the methylation status of the promoter region of the IL-1β gene in TSC and control samples. We identified hypomethylation in the promoter region of the IL-1β gene in TSC samples. IL-1β is overexpressed in tubers, and gene expression is correlated with promoter hypomethylation at CpG and non-CpG sites. Our results provide the first evidence of epigenetic modulation of the IL-1β signaling in TSC. Thus, strategies that target epigenetic alterations could offer new therapeutic avenues to control the persistent activation of interleukin-1β-mediated inflammatory signaling in TSC brain.

Indexed as

DNA MethylationPromoter Regions, GeneticAdolescentBrainCase-Control StudiesChildCpG IslandsEpigenesis, GeneticFemaleHumansInterleukin-1betaMaleTuberous SclerosisUp-RegulationInterleukin-1betaCortical tuberEpigenetic regulationInflammationInterleukin-1βTuberous sclerosis complex

Identifiers

PMID27122151
PMCPMC4972849
OpenAlexW2345243972

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.