Evidence map›Paper›PMID 27121483›Full record

ArticleMolecular microbiology2016

Evolved plasmid-host interactions reduce plasmid interference cost.

Hirokazu Yano, Katarznya Wegrzyn, Wesley Loftie-Eaton, Jenny Johnson, Gail E Deckert, Linda M Rogers, Igor Konieczny, Eva M Top

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 74 citations in OpenAlex.

  1. Host-dependent effects ofFrontiers in microbiology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. The fitness connection of antibiotic resistance.Frontiers in microbiology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Experimental evolution of the megaplasmid pMPPla107 inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  18. Persistence of plasmid andFrontiers in microbiology · 2022
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Hirokazu YanoDepartment of Biological Sciences.
Katarznya WegrzynDepartment of Molecular and Cellular Biology, Intercollegiate Faculty of Biotechnology, University of Gdansk, 24 Kladki, 80-822, Gdansk, Poland.
Wesley Loftie-EatonDepartment of Biological Sciences.
Jenny JohnsonDepartment of Biological Sciences.
Gail E DeckertDepartment of Biological Sciences.
Linda M RogersDepartment of Biological Sciences.
Igor KoniecznyDepartment of Molecular and Cellular Biology, Intercollegiate Faculty of Biotechnology, University of Gdansk, 24 Kladki, 80-822, Gdansk, Poland.
Eva M TopDepartment of Biological Sciences.
University of Idaho · USUniversity of Gdańsk · PLUniversity of Tsukuba · JP

Funding

Women's health: interplay of maternal diet and key demographics on neurological health in the rural frontier and remote WestP20GM103408 · NIGMS · UNIVERSITY OF IDAHO · PI Carolyn Hovde Bohach · 2012 to 2026
$59.8M
UNDERGRADUATE COLLEGE OUTREACH PROGRAMP20RR016454 · NCRR · UNIVERSITY OF IDAHO · PI CHASE, JENNIFER R · 2001 to 2011
$35.3M
The Evolution of Protein FlexibilityP20RR016448 · NCRR · UNIVERSITY OF IDAHO · PI ROBISON, BARRIE D · 2002 to 2011
$19.3M
THE ORIGIN AND SPREAD OF MOSAIC PLASMIDS ENCODING MULTI-DRUG RESISTANCE(Research Supplement to Promote Diversity)R01AI084918 · NIAID · UNIVERSITY OF IDAHO · PI TOP, EVA M. · 2010 to 2022
$3.6M
Center for Research on Processes in EvolutionP20GM103397 · NIGMS · UNIVERSITY OF IDAHO · PI FORNEY, LARRY J · 2012 to 2012
$1.9M
NCRR NIH HHS P20 RR016448NCRR NIH HHS P20 RR016454NIAID NIH HHS R01 AI084918NIGMS NIH HHS P20 GM103397NIGMS NIH HHS P20 GM103408
6 · The paper itself

Abstract

Antibiotic selection drives adaptation of antibiotic resistance plasmids to new bacterial hosts, but the molecular mechanisms are still poorly understood. We previously showed that a broad-host-range plasmid was poorly maintained in Shewanella oneidensis, but rapidly adapted through mutations in the replication initiation gene trfA1. Here we examined if these mutations reduced the fitness cost of TrfA1, and whether this was due to changes in interaction with the host's DNA helicase DnaB. The strains expressing evolved TrfA1 variants showed a higher growth rate than those expressing ancestral TrfA1. The evolved TrfA1 variants showed a lower affinity to the helicase than ancestral TrfA1 and were no longer able to activate the helicase at the oriV without host DnaA. Moreover, persistence of the ancestral plasmid was increased upon overexpression of DnaB. Finally, the evolved TrfA1 variants generated higher plasmid copy numbers than ancestral TrfA1. The findings suggest that ancestral plasmid instability can at least partly be explained by titration of DnaB by TrfA1. Thus under antibiotic selection resistance plasmids can adapt to a novel bacterial host through partial loss of function mutations that simultaneously increase plasmid copy number and decrease unfavorably high affinity to one of the hosts' essential proteins.

Indexed as

DnaB HelicasesDNA-Binding ProteinsDNA HelicasesDNA ReplicationDrug Resistance, MicrobialEscherichia coliEscherichia coli ProteinsPlasmidsShewanellaDnaB HelicasesDNA-Binding ProteinsDNA HelicasesEscherichia coli ProteinsTrfA protein, E coli

Identifiers

PMID27121483
PMCPMC5024541
OpenAlexW2381762528

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.