Evidence map›Paper›PMID 27121327›Full record

ArticleJournal of human genetics2016

Claudin-7 indirectly regulates the integrin/FAK signaling pathway in human colon cancer tissue.

Lei Ding, Liyong Wang, Leiming Sui, Huanying Zhao, Xiaoxue Xu, Tengyan Li, Xiaonan Wang, Wenjing Li, Ping Zhou, Lu Kong

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Tight Junction Proteins and the Biology of Hepatobiliary Disease.International journal of molecular sciences · 2020
    Review
  10. Article
  11. Inhibition of protein FAK enhances 5-FU chemosensitivity to gastric carcinomaComputational and structural biotechnology journal · 2020
    Article
  12. Article
  13. World journal of gastroenterology · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. ZIP4 Promotes Pancreatic Cancer Progression by Repressing ZO-1 and Claudin-1 through a ZEB1-Dependent Transcriptional Mechanism.Clinical cancer research : an official journal of the American Association for Cancer Research · 2018
    Article
  18. Article
  19. Review
  20. CLDN1 Increases Drug Resistance of Non-Small Cell Lung Cancer by Activating Autophagy via Up-Regulation of ULK1 Phosphorylation.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Lei DingDepartment of Oncology, Beijing Shijitan Hospital, Capital Medical University, Beijing, China.
Liyong WangDepartment of Biochemistry and Molecular Biology, Capital Medical University, Beijing, China.
Leiming SuiDepartment of Biochemistry and Molecular Biology, Capital Medical University, Beijing, China.
Huanying ZhaoDepartment of Biochemistry and Molecular Biology, Capital Medical University, Beijing, China.
Xiaoxue XuDepartment of Biochemistry and Molecular Biology, Capital Medical University, Beijing, China.
Tengyan LiDepartment of Oncology, Beijing Shijitan Hospital, Capital Medical University, Beijing, China.
Xiaonan WangDepartment of Oncology, Beijing Shijitan Hospital, Capital Medical University, Beijing, China.
Wenjing LiDepartment of Oncology, Beijing Shijitan Hospital, Capital Medical University, Beijing, China.
Ping ZhouDepartment of Bioinformatics, Biomedical Engineering Institute of Capital Medical University, Capital Medical University, Beijing, China.
Lu KongDepartment of Biochemistry and Molecular Biology, Capital Medical University, Beijing, China.
Capital Medical University · CNBeijing Shijitan Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The claudin family of proteins is integral to the structure and function of tight junctions. The role of claudin-7 (Cldn-7, CLDN7) in regulating the integrin/focal adhesion kinase (FAK)/ERK signaling pathway remains poorly understood. Therefore, we investigated differences in gene expression, primarily focusing on CLDN7 and integrin/FAK/ERK signaling pathway genes, between colon cancer and adjacent normal tissues. Quantitative real-time reverse transcription-PCR and immunohistochemistry were utilized to verify the results of mRNA and protein expression, respectively. In silico analysis was used to predict co-regulation between Cldn-7 and integrin/FAK/ERK signaling pathway components, and the STRING database was used to analyze protein-protein interaction pairs among these proteins. Meta-analysis of expression microarrays in The Cancer Genome Atlas (TCGA) database was used to identify significant correlations between Cldn-7 and components of predicted genes in the integrin/FAK/ERK signaling pathway. Our results showed marked cancer stage-specific decreases in the protein expression of Cldn-7, Gelsolin, MAPK1 and MAPK3 in colon cancer samples, and the observed changes for all proteins except Cldn-7 were in agreement with changes in the corresponding mRNA levels. Cldn-7 might indirectly regulate MAPK3 via KRT8 due to KRT8 co-expression with MAPK3 or CLDN7. Our bioinformatics methods supported the hypothesis that Cldn-7 does not directly regulate any genes in the integrin/FAK/ERK signaling pathway. These factors may participate in a common network that regulates cancer progression in which the MAPK pathway serves as the central node.

Indexed as

Signal TransductionBiomarkersClaudinsCluster AnalysisColonic NeoplasmsComputational BiologyFocal Adhesion Kinase 1Gene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansIntegrinsProtein TransportTissue Array AnalysisTranscriptomeBiomarkersClaudinsCLDN7 protein, humanFocal Adhesion Kinase 1IntegrinsPTK2 protein, human

Identifiers

PMID27121327
OpenAlexW2342466465

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.