Evidence map›Paper›PMID 27120785›Full record

SynthesisOncotarget2016

Reduction in expression of the benign AR transcriptome is a hallmark of localised prostate cancer progression.

Ryan Stuchbery, Geoff Macintyre, Marek Cmero, Laurence M Harewood, Justin S Peters, Anthony J Costello, Christopher M Hovens, Niall M Corcoran

Open access · diamondAbstract readMeta-Analysis
In one paragraph

Synthesis in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ryan StuchberyAustralian Prostate Cancer Research Centre Epworth, Richmond, VIC, Australia.
Geoff MacintyreNICTA Victoria Research Laboratory, University of Melbourne, Parkville, VIC, Australia.
Marek CmeroNICTA Victoria Research Laboratory, University of Melbourne, Parkville, VIC, Australia.
Laurence M HarewoodDepartment of Urology, Royal Melbourne Hospital and University of Melbourne, Parkville, VIC, Australia.
Justin S PetersDepartment of Urology, Royal Melbourne Hospital and University of Melbourne, Parkville, VIC, Australia.
Anthony J CostelloAustralian Prostate Cancer Research Centre Epworth, Richmond, VIC, Australia.
Christopher M HovensAustralian Prostate Cancer Research Centre Epworth, Richmond, VIC, Australia.
Niall M CorcoranAustralian Prostate Cancer Research Centre Epworth, Richmond, VIC, Australia.
University of Melbourne · AUThe Royal Melbourne Hospital · AUProstate Cancer Foundation of Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite the importance of androgen receptor (AR) signalling to prostate cancer development, little is known about how this signalling pathway changes with increasing grade and stage of the disease.

objectiveTo explore changes in the normal AR transcriptome in localised prostate cancer, and its relation to adverse pathological features and disease recurrence.

designPublically accessible human prostate cancer expression arrays as well as RNA sequencing data from the prostate TCGA. Tumour associated PSA and PSAD were calculated for a large cohort of men (n=1108) undergoing prostatectomy. OUTCOME MEASUREMENTS AND STATISTICAL ANALYSIS: We performed a meta-analysis of the expression of an androgen-regulated gene set across datasets using Oncomine. Differential expression of selected genes in the prostate TCGA database was probed using the edgeR Bioconductor package. Changes in tumour PSA density with stage and grade were assessed by Student's t-test, and its association with biochemical recurrence explored by Kaplan-Meier curves and Cox regression.

resultsMeta-analysis revealed a systematic decline in the expression of a previously identified benign prostate androgen-regulated gene set with increasing tumour grade, reaching significance in nine of 25 genes tested despite increasing AR expression. These results were confirmed in a large independent dataset from the TCGA. At the protein level, when serum PSA was corrected for tumour volume, significantly lower levels were observed with increasing tumour grade and stage, and predicted disease recurrence.

conclusionsLower PSA secretion-per-tumour-volume is associated with increasing grade and stage of prostate cancer, has prognostic relevance, and reflects a systematic perturbation of androgen signalling.

Indexed as

Gene Expression Regulation, NeoplasticProstatic NeoplasmsReceptors, AndrogenTranscriptomeCohort StudiesDisease ProgressionHumansKaplan-Meier EstimateMaleNeoplasm Recurrence, LocalOutcome Assessment, Health CarePrognosisProportional Hazards ModelsProstatectomyProstate-Specific AntigenTumor BurdenProstate-Specific AntigenReceptors, Androgenandrogen signallingprognosticsprostate cancerPSA screening

Identifiers

PMID27120785
PMCPMC5058764
OpenAlexW2341016090

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.