Evidence map›Paper›PMID 27120610›Full record

ArticleViruses2016

Glutamic Acid Residues in HIV-1 p6 Regulate Virus Budding and Membrane Association of Gag.

Melanie Friedrich, Christian Setz, Friedrich Hahn, Alina Matthaei, Kirsten Fraedrich, Pia Rauch, Petra Henklein, Maximilian Traxdorf, Torgils Fossen, Ulrich Schubert

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Melanie FriedrichInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Melanie.Friedrich@viro.med.uni-erlangen.de.
Christian SetzInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Christian.Setz@viro.med.uni-erlangen.de.
Friedrich HahnInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Friedrich.Hahn@viro.med.uni-erlangen.de.
Alina MatthaeiInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Alina.Matthaei@viro.med.uni-erlangen.de.
Kirsten FraedrichInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Kirsten.Fraedrich@viro.med.uni-erlangen.de.
Pia RauchInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Pia.Rauch@viro.med.uni-erlangen.de.
Petra HenkleinInstitute of Biochemistry, Charité Universitätsmedizin-Berlin, Berlin 10117, Germany. Petra.Henklein@charite.de.
Maximilian TraxdorfDepartment of Otorhinolaryngology, Head and Neck Surgery, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. maximilian.traxdorf@uk-erlangen.de.
Torgils FossenDepartment of Chemistry and Center for Pharmacy, University of Bergen, Bergen N-5007, Norway. Torgils.Fossen@kj.uib.no.
Ulrich SchubertInstitute of Virology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen 91054, Germany. Ulrich.Schubert@viro.med.uni-erlangen.de.
Friedrich-Alexander-Universität Erlangen-Nürnberg · DECharité - Universitätsmedizin Berlin · DEUniversity of Bergen · NO

Funding

Viral mechanisms of adipocyte dysfuntion: Role of Vpr.R01DK081553 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BALASUBRAMANYAM, ASHOK · 2009 to 2012
$1.9M
NIDDK NIH HHS R01 DK081553NIDDK NIH HHS R01 DK81553
6 · The paper itself

Abstract

The HIV-1 Gag p6 protein regulates the final abscission step of nascent virions from the cell membrane by the action of its two late (L-) domains, which recruit Tsg101 and ALIX, components of the ESCRT system. Even though p6 consists of only 52 amino acids, it is encoded by one of the most polymorphic regions of the HIV-1 gag gene and undergoes various posttranslational modifications including sumoylation, ubiquitination, and phosphorylation. In addition, it mediates the incorporation of the HIV-1 accessory protein Vpr into budding virions. Despite its small size, p6 exhibits an unusually high charge density. In this study, we show that mutation of the conserved glutamic acids within p6 increases the membrane association of Pr55 Gag followed by enhanced polyubiquitination and MHC-I antigen presentation of Gag-derived epitopes, possibly due to prolonged exposure to membrane bound E3 ligases. The replication capacity of the total glutamic acid mutant E0A was almost completely impaired, which was accompanied by defective virus release that could not be rescued by ALIX overexpression. Altogether, our data indicate that the glutamic acids within p6 contribute to the late steps of viral replication and may contribute to the interaction of Gag with the plasma membrane.

Indexed as

Virus ReleaseAmino Acid SequenceCalcium-Binding ProteinsCell Cycle ProteinsCell LineCell MembraneEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusGene ExpressionGlutamic AcidHIV-1HIV InfectionsHumansMutationProtein BindingProtein Interaction Domains and MotifsCalcium-Binding ProteinsCell Cycle ProteinsEndosomal Sorting Complexes Required for Transportgag Gene Products, Human Immunodeficiency VirusGlutamic Acidp6 gag protein, Human immunodeficiency virus 1PDCD6IP protein, humanALIXESCRTGag p6HIV-1">l-domainsmembrane associationTsg101ubiquitinationvirus budding

Identifiers

PMID27120610
PMCPMC4848609
OpenAlexW2342394343

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.