Evidence map›Paper›PMID 27119648›Full record

ArticleBiophysical journal2016

Multisite Phosphorylation Modulates the T Cell Receptor ζ-Chain Potency but not the Switchlike Response.

Himadri Mukhopadhyay, Ben de Wet, Lara Clemens, Philip K Maini, Jun Allard, P Anton van der Merwe, Omer Dushek

Abstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Parallel reactions on a single T cell receptor offer a robust kinetic proofreading mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Himadri MukhopadhyaySir William Dunn School of Pathology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom.
Ben de WetSir William Dunn School of Pathology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom.
Lara ClemensDepartment of Mathematics, University of California-Irvine, Irvine, California.
Philip K MainiWolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom.
Jun AllardDepartment of Mathematics, University of California-Irvine, Irvine, California.
P Anton van der MerweSir William Dunn School of Pathology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom. Electronic address: anton.vandermerwe@path.ox.ac.uk.
Omer DushekSir William Dunn School of Pathology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom; Wolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Oxfordshire, United Kingdom. Electronic address: omer.dushek@path.ox.ac.uk.

Funding

Medical Research Council G9722488Medical Research Council MR/J002011/1Wellcome TrustWellcome Trust 101799
6 · The paper itself

Abstract

Multisite phosphorylation is ubiquitous in cellular signaling and is thought to provide signaling proteins with additional regulatory mechanisms. Indeed, mathematical models have revealed a large number of mechanisms by which multisite phosphorylation can produce switchlike responses. The T cell antigen receptor (TCR) is a multisubunit receptor on the surface of T cells that is a prototypical multisite substrate as it contains 20 sites that are distributed on 10 conserved immunoreceptor tyrosine-based activation motifs (ITAMs). The TCR ζ-chain is a homodimer subunit that contains six ITAMs (12 sites) and exhibits a number of properties that are predicted to be sufficient for a switchlike response. We have used cellular reconstitution to systematically study multisite phosphorylation of the TCR ζ-chain. We find that multisite phosphorylation proceeds by a nonsequential random mechanism, and find no evidence that multiple ITAMs modulate a switchlike response but do find that they alter receptor potency and maximum phosphorylation. Modulation of receptor potency can be explained by a reduction in molecular entropy of the disordered ζ-chain upon phosphorylation. We further find that the tyrosine kinase ZAP-70 increases receptor potency but does not modulate the switchlike response. In contrast to other multisite proteins, where phosphorylations act in strong concert to modulate protein function, we suggest that the multiple ITAMs on the TCR function mainly to amplify subsequent signaling.

Indexed as

AnimalsHEK293 CellsHumansKineticsMicePhosphorylationReceptors, Antigen, T-Cellantigen T cell receptor, zeta chainReceptors, Antigen, T-Cell

Identifiers

PMID27119648
PMCPMC4850346

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.