Evidence map›Paper›PMID 27119520›Full record

ArticlePloS one2016

Generation, Characterization and Application of Antibodies Directed against HERV-H Gag Protein in Colorectal Samples.

Christina S Mullins, Maja Hühns, Mathias Krohn, Sven Peters, Valérie Cheynet, Guy Oriol, Michèle Guillotte, Sandrine Ducrot, François Mallet, Michael Linnebacher

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Christina S MullinsUniversity Medicine Rostock, Department of General Surgery, Molecular Oncology and Immunotherapy, Schillingallee 69, 18057 Rostock, Germany.
Maja HühnsUniversity Medicine Rostock, Institute of Pathology, Strempelstraße 14, 18055 Rostock, Germany.
Mathias KrohnUniversity Medicine Rostock, Department of General Surgery, Molecular Oncology and Immunotherapy, Schillingallee 69, 18057 Rostock, Germany.
Sven PetersUniversity Medicine Rostock, Department of General Surgery, Molecular Oncology and Immunotherapy, Schillingallee 69, 18057 Rostock, Germany.
Valérie CheynetJoint Unit Hospices Civils de Lyon, bioMérieux, Cancer Biomarkers Research Group, Centre Hospitalier Lyon Sud, Bâtiment 3F, 69495, Pierre Bénite cedex, Lyon, France.
Guy OriolJoint Unit Hospices Civils de Lyon, bioMérieux, Cancer Biomarkers Research Group, Centre Hospitalier Lyon Sud, Bâtiment 3F, 69495, Pierre Bénite cedex, Lyon, France.
Michèle GuillotteGlobal R&D Immunoassay, bioMérieux, Marcy l'Etoile, France.
Sandrine DucrotR&D Immunoassay, bioMérieux, Raw Material Department, Marcy l'Etoile, France.
François MalletJoint Unit Hospices Civils de Lyon, bioMérieux, Cancer Biomarkers Research Group, Centre Hospitalier Lyon Sud, Bâtiment 3F, 69495, Pierre Bénite cedex, Lyon, France.
Michael LinnebacherUniversity Medicine Rostock, Department of General Surgery, Molecular Oncology and Immunotherapy, Schillingallee 69, 18057 Rostock, Germany.
University of Rostock · DEbioMérieux (France) · FRHôpital Lyon Sud · FRHospices Civils de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionA substantial part of the human genome originates from transposable elements, remnants of ancient retroviral infections. Roughly 8% of the human genome consists of about 400,000 LTR elements including human endogenous retrovirus (HERV) sequences. Mainly, the interplay between epigenetic and post-transcriptional mechanisms is thought to silence HERV expression in most physiological contexts. Interestingly, aberrant reactivation of several HERV-H loci appears specific to colorectal carcinoma (CRC).

resultsThe expression of HERV-H Gag proteins (Gag-H) was assessed using novel monoclonal mouse anti Gag-H antibodies. In a flow cytometry screen four antibody clones were tested on a panel of primary CRC cell lines and the most well performing ones were subsequently validated in western blot analysis. Finally, Gag-H protein expression was analyzed by immune histology on cell line cytospins and on clinical samples. There, we found a heterogeneous staining pattern with no background staining of endothelial, stromal and infiltrating immune cells but diffuse staining of the cytoplasm for positive tumor and normal crypt cells of the colonic epithelium.

conclusionTaken together, the Gag-H antibody clone(s) present a valuable tool for staining of cells with colonic origin and thus form the basis for future more detailed investigations. The observed Gag-H protein staining in colonic epithelium crypt cells demands profound analyses of a potential role for Gag-H in the normal physiology of the human gut.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalCell LineColonColorectal NeoplasmsCytoplasmEndogenous RetrovirusesFemaleGene Products, gagGenome, HumanHEK293 CellsHumansIntestinal MucosaMiceMice, Inbred BALB CAntibodies, MonoclonalGene Products, gagRecombinant Proteins

Identifiers

PMID27119520
PMCPMC4847760
OpenAlexW2342385938

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.