Evidence map›Paper›PMID 27118210›Full record

ArticleNature communications2016

Optical painting and fluorescence activated sorting of single adherent cells labelled with photoswitchable Pdots.

Chun-Ting Kuo, Alison M Thompson, Maria Elena Gallina, Fangmao Ye, Eleanor S Johnson, Wei Sun, Mengxia Zhao, Jiangbo Yu, I-Che Wu, Bryant Fujimoto and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Synergistic Effect of Uroguanylin and DJournal of the American Heart Association · 2022
    Article
  8. Article
  9. Article
  10. Turn-on mode diarylethenes for bioconjugation and fluorescence microscopy of cellular structures.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Chun-Ting KuoDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Alison M ThompsonDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Maria Elena GallinaDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Fangmao YeDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Eleanor S JohnsonDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Wei SunDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Mengxia ZhaoDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Jiangbo YuDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.ORCID http://orcid.org/0000-0001-6708-9781
I-Che WuDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Bryant FujimotoDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Christopher C DuFortClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Markus A CarlsonClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Sunil R HingoraniClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Amy L PaguiriganClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Jerald P RadichClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Daniel T ChiuDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.

Funding

Single-Cell Methods for Analysis of Clonal Heterogeneity and Evolution in CancerR01CA175215 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI RADICH, JERALD PATRICK · 2013 to 2017
$3.0M
Ultra-Bright Probes with Ultra-Narrow Emission for Molecular and Cellular AnalysiR21CA186798 · NCI · UNIVERSITY OF WASHINGTON · PI CHIU, DANIEL T · 2014 to 2016
$672k
NCI NIH HHS R01 CA175215NCI NIH HHS R21 CA186798
6 · The paper itself

Abstract

The efficient selection and isolation of individual cells of interest from a mixed population is desired in many biomedical and clinical applications. Here we show the concept of using photoswitchable semiconducting polymer dots (Pdots) as an optical 'painting' tool, which enables the selection of certain adherent cells based on their fluorescence, and their spatial and morphological features, under a microscope. We first develop a Pdot that can switch between the bright (ON) and dark (OFF) states reversibly with a 150-fold contrast ratio on irradiation with ultraviolet or red light. With a focused 633-nm laser beam that acts as a 'paintbrush' and the photoswitchable Pdots as the 'paint', we select and 'paint' individual Pdot-labelled adherent cells by turning on their fluorescence, then proceed to sort and recover the optically marked cells (with 90% recovery and near 100% purity), followed by genetic analysis.

Indexed as

FluorescenceQuantum DotsSemiconductorsHumansMCF-7 CellsMicroscopy, ConfocalMicroscopy, FluorescenceMolecular ImagingPolymersPolymers

Identifiers

PMID27118210
PMCPMC4853474

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.