Evidence map›Paper›PMID 27117801›Full record

ArticlePhysiological reports2016

Functional and transport analyses of CLCN5 genetic changes identified in Dent disease patients.

Xiaojing Tang, Matthew R Brown, Andrea G Cogal, Daniel Gauvin, Peter C Harris, John C Lieske, Michael F Romero, Min-Hwang Chang

Open access · goldAbstract read
In one paragraph

Article in Physiological reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Database ofKidney international reports · 2026
    Article
  2. Review
  3. The Site and Type ofKidney international reports · 2023
    Article
  4. Review
  5. Review
  6. Review
  7. ClThe Journal of biological chemistry · 2020
    Article
  8. Article
  9. A NovelJournal of pediatric genetics · 2019
    Article
  10. Article
  11. Digenic mutations of humanHuman genome variation · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Xiaojing TangO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Nephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota Division of Nephrology, Shanghai Changzheng Hospital Second Military Medical University, Shanghai, China.
Matthew R BrownO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Physiology & Biomedical Engineering, Mayo Clinic College of Medicine, Rochester, Minnesota Wayne State University, Detroit, Michigan.
Andrea G CogalNephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota.
Daniel GauvinO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Nephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota.
Peter C HarrisNephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota Biochemistry and Molecular Biology, Mayo Clinic College of Medicine, Rochester, Minnesota.
John C LieskeO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Nephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota.
Michael F RomeroO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Nephrology and Hypertension, Mayo Clinic College of Medicine, Rochester, Minnesota Physiology & Biomedical Engineering, Mayo Clinic College of Medicine, Rochester, Minnesota.
Min-Hwang ChangO'Brien Urology Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota Physiology & Biomedical Engineering, Mayo Clinic College of Medicine, Rochester, Minnesota chang.minhwang@mayo.edu.
Mayo Clinic · USWayne State University · US

Funding

Primary HyperoxaluriaU54DK083908 · NIDDK · MAYO CLINIC ROCHESTER · PI MILLINER, DAWN SCHMAUTZ · 2009 to 2018
$12.3M
VISUALIZATION AND PATHOPHYSIOLOGY OF RENAL STONE PRECURSOR LESIONSU54DK100227 · NIDDK · MAYO CLINIC ROCHESTER · PI LIESKE, JOHN C · 2013 to 2017
$6.3M
Mayo Clinic Summer Undergraduate Research in Nephrology & UrologyR25DK101405 · NIDDK · MAYO CLINIC ROCHESTER · PI MICHAEL F. ROMERO · 2014 to 2026
$1.6M
Drosophila model of oxalate nephrolithiasisR01DK092408 · NIDDK · MAYO CLINIC ROCHESTER · PI DOW, JULIAN ALEXANDER, ROMERO, MICHAEL F. · 2012 to 2015
$837k
NIDDK NIH HHS R01 DK092408NIDDK NIH HHS R25 DK101405NIDDK NIH HHS U54 DK083908NIDDK NIH HHS U54-DK083908NIDDK NIH HHS U54 DK100227
6 · The paper itself

Abstract

Dent disease type 1, an X-linked inherited kidney disease is caused by mutations in electrogenic Cl(-)/H(+) exchanger, ClC-5. We functionally studied the most frequent mutation (S244L) and two mutations recently identified in RKSC patients, Q629X and R345W. We also studied T657S, which has a high minor-allele frequency (0.23%) in the African-American population, was published previously as pathogenic to cause Dent disease. The transport properties of CLC-5 were electrophysiologically characterized. WT and ClC-5 mutant currents were inhibited by pH 5.5, but not affected by an alkaline extracellular solution (pH 8.5). The T657S and R345W mutations showed the same anion selectivity sequence as WT ClC-5 (SCN(-)>NO3(-)≈Cl(-)>Br(-)>I(-)). However, the S244L and Q629X mutations abolished this anion conductance sequence. Cell surface CLC-5 expression was quantified using extracellular HA-tagged CLC-5 and a chemiluminescent immunoassay. Cellular localization of eGFP-tagged CLC-5 proteins was also examined in HEK293 cells with organelle-specific fluorescent probes. Functional defects of R345W and Q629X mutations were caused by the trafficking of the protein to the plasma membrane since proteins were mostly retained in the endoplasmic reticulum, and mutations showed positive correlations between surface expression and transport function. In contrast, although the S244L transport function was significantly lower than WT, cell surface, early endosome, and endoplasmic reticulum expression was equal to that of WT CLC-5. Function and trafficking of T657S was equivalent to the WT CLC-5 suggesting this is a benign variant rather than pathogenic. These studies demonstrate the useful information that can be gained by detailed functional studies of mutations predicted to be pathogenic.

Indexed as

Amino Acid SequenceChloride ChannelsDent DiseaseHEK293 CellsHumansLuminescent MeasurementsMolecular Sequence DataMutationPatch-Clamp TechniquesProtein TransportRegistriesTransfectionChloride ChannelsCLC-5 chloride channelAnion selectivitypH dependenceprotein traffickingvoltage clamp

Identifiers

PMID27117801
PMCPMC4848727
OpenAlexW2342669599

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.