Evidence map›Paper›PMID 27114508›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Reticulate evolution is favored in influenza niche switching.

Eric J Ma, Nichola J Hill, Justin Zabilansky, Kyle Yuan, Jonathan A Runstadler

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  8. JDS communications · 2024
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  18. H5N8 and H7N9 packaging signals constrain HA reassortment with a seasonal H3N2 influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eric J MaDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139; jrun@mit.edu ericmajinglong@gmail.com.ORCID 0000-0003-0041-5989
Nichola J HillDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139;
Justin ZabilanskyDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139;
Kyle YuanDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139;
Jonathan A RunstadlerDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139; Division of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA 02139 jrun@mit.edu ericmajinglong@gmail.com.

Funding

National Institute for Allergy HHSN272014000008C
6 · The paper itself

Abstract

Reticulate evolution is thought to accelerate the process of evolution beyond simple genetic drift and selection, helping to rapidly generate novel hybrids with combinations of adaptive traits. However, the long-standing dogma that reticulate evolutionary processes are likewise advantageous for switching ecological niches, as in microbial pathogen host switch events, has not been explicitly tested. We use data from the influenza genome sequencing project and a phylogenetic heuristic approach to show that reassortment, a reticulate evolutionary mechanism, predominates over mutational drift in transmission between different host species. Moreover, as host evolutionary distance increases, reassortment is increasingly favored. We conclude that the greater the quantitative difference between ecological niches, the greater the importance of reticulate evolutionary processes in overcoming niche barriers.

Indexed as

Evolution, MolecularAlphainfluenzavirusAnimalsEcosystemHost-Parasite InteractionsHumansInfluenza, HumanReassortant VirusesSpecies Specificityecologyhost switchinfluenzareassortmentreticulate evolution

Identifiers

PMID27114508
PMCPMC4868476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.