Evidence map›Paper›PMID 27112789›Full record

ArticleNature communications2016

Diverse human extracellular RNAs are widely detected in human plasma.

Jane E Freedman, Mark Gerstein, Eric Mick, Joel Rozowsky, Daniel Levy, Robert Kitchen, Saumya Das, Ravi Shah, Kirsty Danielson, Lea Beaulieu and 10 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 136 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed, 1 pooled it
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 1 synthesis or guideline pooled it, 209 citations in OpenAlex.

  1. Pooled it
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  15. Liquid Biopsy: The Challenges of a Revolutionary Approach in Oncology.International journal of molecular sciences · 2025
    Review
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76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 1 country.

Jane E FreedmanUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
Mark GersteinYale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
Eric MickUniversity of Massachusetts Medical School, Department of Quantitative Health Sciences, Worcester, Massachusetts 01605, USA.
Joel RozowskyYale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
Daniel LevyThe Framingham Heart Study, Framingham, Massachusetts 01702, USA.
Robert KitchenYale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
Saumya DasCardiovascular Institute, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
Ravi ShahCardiovascular Institute, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
Kirsty DanielsonCardiovascular Institute, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
Lea BeaulieuUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
Fabio C P NavarroYale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
Yaoyu WangCenter for Cancer Computational Biology, Dana Farber Cancer Institute, Boston, Massachusetts 02215, USA.
Timur R GaleevYale University Medical School, Computational Biology and Bioinformatics Program, New Haven, Connecticut 06520, USA.
Alex HolmanCenter for Cancer Computational Biology, Dana Farber Cancer Institute, Boston, Massachusetts 02215, USA.
Raymond Y KwongCardiovascular Division, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, USA.
Venkatesh MurthyUniversity of Michigan, Ann Arbor, Michigan 48409, USA.ORCID http://orcid.org/0000-0002-7901-1321
Selim E TanriverdiUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
Milka Koupenova-ZamorUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
Ekaterina MikhalevUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.ORCID http://orcid.org/0000-0001-6275-4463
Kahraman TanriverdiUniversity of Massachusetts Medical School, Department of Medicine, Division of Cardiovascular Medicine, Worcester, Massachusetts 01605, USA.
University of Massachusetts Chan Medical School · USYale University · USBeth Israel Deaconess Medical Center · USDana-Farber Cancer Institute · USBrigham and Women's Hospital · USNational Institutes of Health · USUniversity of Michigan · US

Funding

Framingham Project/LevyZIAHL006001 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEVY, DANIEL · 2009 to 2025
$51.1M
Translational Research Skills Development CoreU54HL112311 · NHLBI · UNIVERSITY OF UTAH · PI WEYRICH, ANDREW S, ZIMMERMAN, GUY A. · 2012 to 2016
$12.9M
Racial and Ethnic Diversity in Human Extracellular RNAU01HL126495 · NHLBI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FREEDMAN, JANE E, GERSTEIN, MARK BENDER · 2014 to 2018
$3.4M
Plasma miRNA predictors of adverse mechanical and electrical remodeling after MIUH3TR000901 · NCATS · MASSACHUSETTS GENERAL HOSPITAL · PI DAS, SAUMYA, KWONG, RAYMOND Y · 2015 to 2017
$3.2M
Extracellular RNAs: Biomarkers for Cardiovascular Risk and DiseaseUH3TR000921 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FREEDMAN, JANE E · 2015 to 2017
$3.1M
Plasma miRNA predictors of adverse mechanical and electrical remodeling after MIUH2TR000901 · NCATS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI DAS, SAUMYA, KWONG, RAYMOND Y · 2013 to 2014
$1.1M
Extracellular RNAs: Biomarkers for Cardiovascular Risk and DiseaseUH2TR000921 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FREEDMAN, JANE E · 2013 to 2014
$1.0M
Myocardial tissue architecture in heart failure: implications on physiology and fitnessK23HL127099 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI SHAH, RAVI · 2016 to 2019
$668k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NCATS NIH HHS UH2 TR000901NCATS NIH HHS UH2TR000901NCATS NIH HHS UH2 TR000921NCATS NIH HHS UH2TR000921NCATS NIH HHS UH3 TR000901NCATS NIH HHS UH3 TR000921NHLBI NIH HHS K23 HL127099NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC 25195NHLBI NIH HHS P01-HL085381NHLBI NIH HHS U01 HL126495NHLBI NIH HHS U01HL126495NHLBI NIH HHS U54 HL112311
6 · The paper itself

Abstract

There is growing appreciation for the importance of non-protein-coding genes in development and disease. Although much is known about microRNAs, limitations in bioinformatic analyses of RNA sequencing have precluded broad assessment of other forms of small-RNAs in humans. By analysing sequencing data from plasma-derived RNA from 40 individuals, here we identified over a thousand human extracellular RNAs including microRNAs, piwi-interacting RNA (piRNA), and small nucleolar RNAs. Using a targeted quantitative PCR with reverse transcription approach in an additional 2,763 individuals, we characterized almost 500 of the most abundant extracellular transcripts including microRNAs, piRNAs and small nucleolar RNAs. The presence in plasma of many non-microRNA small-RNAs was confirmed in an independent cohort. We present comprehensive data to demonstrate the broad and consistent detection of diverse classes of circulating non-cellular small-RNAs from a large population.

Indexed as

Genome, HumanAgedFemaleGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansLongitudinal StudiesMaleMicroRNAsMiddle AgedMolecular Sequence AnnotationReal-Time Polymerase Chain ReactionRNA, Small InterferingRNA, Small NucleolarUnited StatesMicroRNAsRNA, Small InterferingRNA, Small Nucleolar

Identifiers

PMID27112789
PMCPMC4853467
OpenAlexW2343804686

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.