Evidence map›Paper›PMID 27112153›Full record

ArticleJournal of the American Society for Mass Spectrometry2016

Substrate and Substrate-Mimetic Chaperone Binding Sites in Human α-Galactosidase A Revealed by Affinity-Mass Spectrometry.

Adrian Moise, Stefan Maeser, Stephan Rawer, Frederike Eggers, Mary Murphy, Jeff Bornheim, Michael Przybylski

Abstract read
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In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Adrian MoiseSteinbeis Center for Biopolymer Analysis and Biomedical Mass Spectrometry, 65428, Rüsselsheim am Main, Germany.
Stefan MaeserSteinbeis Center for Biopolymer Analysis and Biomedical Mass Spectrometry, 65428, Rüsselsheim am Main, Germany.
Stephan RawerThermoFisher Scientific, Franfurter Strasse 129, 64269, Darmstadt, Germany.
Frederike EggersLaboratory of Analytical Chemistry, University of Konstanz, 78457, Konstanz, Germany.
Mary MurphyAmetek-Reichert Technologies, 3362 Walden Avenue, 14043, Buffalo, NY, USA.
Jeff BornheimAmetek-Reichert Technologies, 3362 Walden Avenue, 14043, Buffalo, NY, USA.
Michael PrzybylskiSteinbeis Center for Biopolymer Analysis and Biomedical Mass Spectrometry, 65428, Rüsselsheim am Main, Germany. Michael.przybylski@stw.de.
Steinbeis Foundation · DEAmetek (United States) · USThermo Fisher Scientific (Germany) · DEUniversity of Konstanz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fabry disease (FD) is a rare metabolic disorder of a group of lysosomal storage diseases, caused by deficiency or reduced activity of the enzyme α-galactosidase. Human α-galactosidase A (hαGAL) hydrolyses the terminal α-galactosyl moiety from glycosphingolipids, predominantly globotriaosylceramide (Gb3). Enzyme deficiency leads to incomplete or blocked breakdown and progressive accumulation of Gb3, with detrimental effects on normal organ functions. FD is successfully treated by enzyme replacement therapy (ERT) with purified recombinant hαGAL. An emerging treatment strategy, pharmacologic chaperone therapy (PCT), employs small molecules that can increase and/or reconstitute the activity of lysosomal enzyme trafficking by stabilizing misfolded isoforms. One such chaperone, 1-deoxygalactonojirimycin (DGJ), is a structural galactose analogue currently validated in clinical trials. DGJ is an active-site-chaperone that binds at the same or similar location as galactose; however, the molecular determination of chaperone binding sites in lysosomal enzymes represents a considerable challenge. Here we report the identification of the galactose and DGJ binding sites in recombinant α-galactosidase through a new affinity-mass spectrometry-based approach that employs selective proteolytic digestion of the enzyme-galactose or -inhibitor complex. Binding site peptides identified by mass spectrometry, [39-49], [83-100], and [141-168], contain the essential ligand-contacting amino acids, in agreement with the known X-ray crystal structures. The inhibitory effect of DGJ on galactose recognition was directly characterized through competitive binding experiments and mass spectrometry. The methods successfully employed in this study should have high potential for the characterization of (mutated) enzyme-substrate and -chaperone interactions, and for identifying chaperones without inhibitory effects. Graphical Abstract ᅟ.

Indexed as

Mass SpectrometryMolecular Chaperonesalpha-GalactosidaseBinding SitesFabry DiseaseHumansalpha-GalactosidaseMolecular ChaperonesAffinity-mass spectrometryBinding sitesChaperonesFabry diseaseHuman α-galactosidaseProteolytic extraction

Identifiers

PMID27112153
OpenAlexW2343365711

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.