Evidence map›Paper›PMID 27111767›Full record

ArticleArthritis & rheumatology (Hoboken, N.J.)2016

Epigenetic Reprogramming in Naive CD4+ T Cells Favoring T Cell Activation and Non-Th1 Effector T Cell Immune Response as an Early Event in Lupus Flares.

Patrick Coit, Mikhail G Dozmorov, Joan T Merrill, W Joseph McCune, Kathleen Maksimowicz-McKinnon, Jonathan D Wren, Amr H Sawalha

Open access · greenAbstract read
In one paragraph

Article in Arthritis & rheumatology (Hoboken, N.J.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 1 pooled it
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 1 synthesis or guideline pooled it, 127 citations in OpenAlex.

  1. Pooled it
  2. Differential transcriptional and epigenetic signatures in CD4Journal of translational autoimmunity · 2026
    Article
  3. Article
  4. Article
  5. Immunometabolism in systemic lupus erythematosus.Nature reviews. Rheumatology · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Inducible deletion ofiScience · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Methylation of T and B Lymphocytes in Autoimmune Rheumatic Diseases.Clinical reviews in allergy & immunology · 2024
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Methylation ofDiagnostics (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Patrick CoitUniversity of Michigan, Ann Arbor.
Mikhail G DozmorovVirginia Commonwealth University, Richmond.
Joan T MerrillOklahoma Medical Research Foundation, Oklahoma City.
W Joseph McCuneUniversity of Michigan, Ann Arbor.
Kathleen Maksimowicz-McKinnonHenry Ford Health System, Detroit, Michigan.
Jonathan D WrenOklahoma Medical Research Foundation and University of Oklahoma, Oklahoma City.
Amr H SawalhaUniversity of Michigan, Ann Arbor.
University of Michigan–Ann Arbor · USOklahoma Medical Research Foundation · USHenry Ford Health System · USVirginia Commonwealth University · US

Funding

Role of DNA methylation in lupusR01AI097134 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Amr H Sawalha · 2013 to 2026
$4.5M
NIAID NIH HHS R01 AI097134
6 · The paper itself

Abstract

objectiveSystemic lupus erythematosus (SLE) is a relapsing autoimmune disease that affects multiple organ systems. T cells play an important role in the pathogenesis of lupus; however, early T cell events triggering disease flares are incompletely understood. This study was undertaken to examine DNA methylation in naive CD4+ T cells from lupus patients to determine if epigenetic remodeling in CD4+ T cells is an early event in lupus flares.

methodsA total of 74 lupus patients with an SLE Disease Activity Index score of 0-18 were included. Naive CD4+ T cells were isolated from peripheral blood samples, and DNA was extracted for genome-wide methylation assessment. RNA was also extracted from a subset of patients to determine the relationship between epigenetic changes and transcription activity using RNA sequencing and microRNA arrays.

resultsWe demonstrated that naive CD4+ T cells in lupus undergo an epigenetic proinflammatory shift, implicating effector T cell responses in lupus flare. This epigenetic landscape change occurs without changes in expression of the corresponding genes, poises naive CD4+ T cells for Th2, Th17, and follicular helper T cell immune responses, and opposes inhibitory transforming growth factor β signaling. Bioinformatics analyses indicate that the epigenetic modulator EZH2 might play an important role in shifting the epigenetic landscape, with increased disease activity in lupus naive CD4+ T cells. Further, the expression of microRNA-26a, which is sensitive to glucose availability and targets EZH2, was negatively correlated with disease activity in lupus patients.

conclusionAn epigenetic landscape shift in naive CD4+ T cells that favors T cell activation and non-Th1 immune responses predates transcription activity and correlates with lupus activity. A role for EZH2 dysregulation in triggering lupus flares warrants further investigation.

Indexed as

CD4-Positive T-LymphocytesAdolescentAdultAgedDNA MethylationEpigenesis, GeneticFemaleHumansLupus Erythematosus, SystemicLymphocyte ActivationMiddle AgedTime FactorsT-Lymphocytes, Helper-InducerYoung Adult

Identifiers

PMID27111767
PMCPMC5001909
OpenAlexW2343395955

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.