Evidence map›Paper›PMID 27109508›Full record

ArticleLeukemia2016

Development and evaluation of a secondary reference panel for BCR-ABL1 quantification on the International Scale.

N C P Cross, H E White, T Ernst, L Welden, C Dietz, G Saglio, F-X Mahon, C C Wong, D Zheng, S Wong and 46 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 59 citations in OpenAlex.

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  15. Article
  16. Digital PCR can provide improvedPractical laboratory medicine · 2021
    Article
  17. Article
  18. Article
  19. Minimal Residual Disease Detection in Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors at 20 institutions in 23 countries.

N C P CrossWessex Regional Genetics Laboratory, Salisbury NHS Foundation Trust, Salisbury, UK.
H E WhiteWessex Regional Genetics Laboratory, Salisbury NHS Foundation Trust, Salisbury, UK.
T ErnstDepartment of Hematology/Oncology, Universitätsklinikum Jena, Jena, Germany.
L WeldenDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
C DietzIII. Medizinische Klinik, Medizinische Fakultät Mannheim, Universität Heidelberg, Mannheim, Germany.
G SaglioDepartment of Clinical and Biological Sciences, San Luigi Hospital, University of Turin, Orbassano, Italy.
F-X MahonBergonie Institute Cancer Center Bordeaux, INSERM U1218, University of Bordeaux, Bordeaux, France.
C C WongNovartis Pharmaceuticals Corporation, East Hanover, NJ, USA.
D ZhengNovartis Pharmaceuticals Corporation, East Hanover, NJ, USA.
S WongNovartis Pharmaceuticals Corporation, East Hanover, NJ, USA.
S-S WangNovartis Pharmaceuticals Corporation, East Hanover, NJ, USA.
S AkikiWest Midlands Regional Genetics Laboratory, Birmingham, UK.
F AlbanoDepartment of Hematology, University of Bari, Bari, Italy.
H AndrikovicsLaboratory of Molecular Diagnostics, Hungarian National Blood Transfusion Service, Budapest, Hungary.
J AnwarKing's College Hospital London, London, UK.
G BalatzenkoNational Specialized Hospital for Active Treatment of Hematological Diseases, Sofia, Bulgaria.
I BenditLaboratorio de Biologia Tumoral, Disciplina de Hematologia do HC-FMUSP, São Paulo, Brazil.
J BeveridgePathWest Laboratory Medicine WA, Department of Haematology, Fiona Stanley Hospital, Perth, WA, Australia.
N BoeckxDepartment of Laboratory Medicine, University Hospitals Leuven, Leuven, Belgium.
N CerveiraDepartment of Genetics, Portuguese Oncology Institute, Porto, Portugal.
S-M ChengDepartment of Hematology and Oncology, Quest Diagnostics Nichols Institute, San Juan Capistrano, CA, USA.
D ColomerHematopathology Unit, Hospital Clinic, IDIBAPS, Barcelona, Spain.
S CzurdaDivision of Molecular Microbiology, Children's Cancer Research Institute, Vienna, Austria.
F DaraioDepartment of Clinical and Biological Sciences, San Luigi Hospital, University of Turin, Orbassano, Italy.
S DulucqLaboratoire Hematologie, Centre Hospitalier Universitaire de Bordeaux, Universite Bordeaux, Bordeaux, France.
L EggenLaboratory of Molecular Pathology, Oslo University Hospital, Oslo, Norway.
H El HousniClinique de Genetique Oncologique-Service de genetique, Hopital Erasme, Brussels, Belgium.
G GerrardImperial Molecular Pathology, Hammersmith Hospital, London, UK.
M GniotDepartment of Hematology and Bone Marrow Transplantation, Poznan University of Medical Sciences, Poznan, Poland.
B IzzoDepartment of Clinical Medicine and Surgery, University 'Federico II' of Naples, Naples, Italy.
D JacquinGenoptix, Inc., Carlsbad, CA, USA.
J J W M JanssenDepartment of Hematology and Molecular Diagnostics, VU University Medical Center, Amsterdam, The Netherlands.
S JerominMLL Munich Leukemia Laboratory, Munich, Germany.
T JurcekCenter of Molecular Biology and Gene Therapy, Department of Internal Medicine-Hematology and Oncology, Masaryk University and University Hospital Brno, Brno, Czech Republic.
D-W KimSeoul St Mary's Hospital, Leukemia Research Institute, The Catholic University of Korea, Seoul, Korea.
K Machova-PolakovaDepartment of Molecular Genetics, Institute of Hematology and Blood Transfusion, Prague, Czech Republic.
J Martinez-LopezDepartment of Hematology, Hospital Universitario 12 de Octubre, Universidad Complutense, CNIO, Madrid, Spain.
M McBeanDivision of Cancer Medicine, Department of Pathology, Peter MacCallum Cancer Centre, East Melbourne, VIC, Australia.
S MesanovicPathology Department, University Clinical Center Tuzla, Tuzla, Bosnia and Herzegovina.
G Mitterbauer-HohendannerDepartment of Laboratory Medicine, Division of Medical and Chemical Laboratory Diagnostics, Medical University of Vienna, Vienna, Austria.
H MobtakerGenoptix, Inc., Carlsbad, CA, USA.
M-J MozziconacciDepartement de Biopathologie, Institut Paoli-Calmettes, Marseille, France.
T PajičSpecialized Haematology Laboratory, Department of Haematology, University Medical Centre Ljubljana, Ljubljana, Slovenia.
N PallisgaardDepartment of Surgical Pathology, Zealand University Hospital, Roskilde, Denmark.
P PanagiotidisHematology Unit, First Department of Internal Medicine, Laiko Hospital, University of Athens, Athens, Greece.
R D PressDepartment of Pathology and Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
Y-Z QinPeking University People's Hospital, Peking University Institute of Hematology, Beijing, China.
J RadichFred Hutchinson Cancer Research Center, Seattle, WA, USA.
T SachaChair and Department of Hematology, Jagiellonian University, Kraków, Poland.
T TouloumenidouLaboratory of Molecular Biology, Hematology Department and HCT Unit, G. Papanicolaou Hospital, Thessaloniki, Greece.
P WaitsBristol Genetics Laboratory, Bristol, UK.
E WilkinsonHMDS, Leeds Teaching Hospitals, Leeds, UK.
R ZadroFaculty of Pharmacy and Biochemistry and University Hospital Center Zagreb, University of Zagreb, Zagreb, Croatia.
M C MüllerIII. Medizinische Klinik, Medizinische Fakultät Mannheim, Universität Heidelberg, Mannheim, Germany.
A HochhausDepartment of Hematology/Oncology, Universitätsklinikum Jena, Jena, Germany.
S BranfordDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Novartis (United States) · USJena University Hospital · DEUniversity of Turin · ITWessex Regional Genetics Laboratory · GBAmsterdam UMC Location VUmc · NLBristol Robotics Laboratory · GBCatholic University of Korea · KRCeinge Biotecnologie Avanzate (Italy) · ITCentre for Cancer Biology · AUCentre Hospitalier Universitaire de Bordeaux · FRErasmus Hospital · BEFiona Stanley Hospital · AUFred Hutch Cancer Center · USG. Papanikolaou General Hospital · GRHammersmith Hospital · GBHeidelberg University · DEHospital Clínic de Barcelona · ESHospital Universitario 12 De Octubre · ESInstitute of Haematology and Blood Transfusion · CZInstituto Português de Oncologia Francisco Gentil · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular monitoring of chronic myeloid leukemia patients using robust BCR-ABL1 tests standardized to the International Scale (IS) is key to proper disease management, especially when treatment cessation is considered. Most laboratories currently use a time-consuming sample exchange process with reference laboratories for IS calibration. A World Health Organization (WHO) BCR-ABL1 reference panel was developed (MR(1)-MR(4)), but access to the material is limited. In this study, we describe the development of the first cell-based secondary reference panel that is traceable to and faithfully replicates the WHO panel, with an additional MR(4.5) level. The secondary panel was calibrated to IS using digital PCR with ABL1, BCR and GUSB as reference genes and evaluated by 44 laboratories worldwide. Interestingly, we found that >40% of BCR-ABL1 assays showed signs of inadequate optimization such as poor linearity and suboptimal PCR efficiency. Nonetheless, when optimized sample inputs were used, >60% demonstrated satisfactory IS accuracy, precision and/or MR(4.5) sensitivity, and 58% obtained IS conversion factors from the secondary reference concordant with their current values. Correlation analysis indicated no significant alterations in %BCR-ABL1 results caused by different assay configurations. More assays achieved good precision and/or sensitivity than IS accuracy, indicating the need for better IS calibration mechanisms.

Indexed as

CalibrationFusion Proteins, bcr-ablGenes, ablHumansPolymerase Chain ReactionProto-Oncogene Proteins c-bcrReference StandardsWorld Health OrganizationBCR protein, humanFusion Proteins, bcr-ablProto-Oncogene Proteins c-bcr

Identifiers

PMID27109508
PMCPMC5240017
OpenAlexW2342971750

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.