Evidence map›Paper›PMID 27109192›Full record

ReviewDevelopmental biology2017

Expanding the genetic toolkit in Xenopus: Approaches and opportunities for human disease modeling.

Panna Tandon, Frank Conlon, J David Furlow, Marko E Horb

Open access · hybridAbstract readReview
In one paragraph

Review in Developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 124 citations in OpenAlex.

  1. Current issues in molecular biology · 2026
    Review
  2. Article
  3. Assessing circuit function in the developingFrontiers in behavioral neuroscience · 2026
    Review
  4. TheBiomolecules · 2025
    Review
  5. An IMPDH2 variant associated with neurodevelopmental disorder disrupts purine biosynthesis and somite organization.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Methods for Tattooing Xenopus laevis with a Rotary Tattoo Machine.Journal of visualized experiments : JoVE · 2024
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Effective Rapid Blood Perfusion in Xenopus.Journal of visualized experiments : JoVE · 2023
    Article
  17. Article
  18. Effective Rapid Blood Perfusion inbioRxiv : the preprint server for biology · 2023
    Article
  19. Use of Frogs as a Model to Study the Etiology of HLHS.Journal of cardiovascular development and disease · 2023
    Article
  20. Recognition of H2AK119ub plays an important role in RSF1-regulated earlyFrontiers in cell and developmental biology · 2023
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Panna TandonUniversity of North Carolina McAllister Heart Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280, United States. Electronic address: ptandon@email.unc.edu.
Frank ConlonUniversity of North Carolina McAllister Heart Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280, United States.
J David FurlowDeparment of Neurobiology, Physiology and Behavior, University of California, Davis, CA 95616, United States.
Marko E HorbNational Xenopus Resource and Eugene Bell Center for Regenerative Biology and Tissue Engineering, Marine Biological Laboratory, Woods Hole, MA 02543, United States. Electronic address: mhorb@mbl.edu.
University of North Carolina at Chapel Hill · USMarine Biological Laboratory · USUniversity of California, Davis · US

Funding

Resource CoreP40OD010997 · OD · MARINE BIOLOGICAL LABORATORY · PI Marko E Horb · 2012 to 2026
$13.1M
Xenopus models of human disease by targeted genome editingR01HD084409 · NICHD · MARINE BIOLOGICAL LABORATORY · PI HORB, MARKO E · 2015 to 2019
$2.9M
Functional investigation of the TBX20 cardiac interactomeR01HL127640 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO, CRISTEA, ILEANA M. · 2015 to 2018
$2.5M
Molecular and Genetic Analysis of Castor in Cardiac DevelopmentR01HL112618 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO · 2012 to 2016
$2.1M
Molecular networks of epicardial formation and functionR01HL135007 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO · 2017 to 2020
$2.1M
Retinoid-X receptors: signaling hubs and novel targets of endocrine disruptionR21ES026271 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FURLOW, JOHN DAVID · 2016 to 2017
$432k
NHLBI NIH HHS R01 HL112618NHLBI NIH HHS R01 HL127640NHLBI NIH HHS R01 HL135007NICHD NIH HHS R01 HD084409NIEHS NIH HHS R21 ES026271NIH HHS P40 OD010997
6 · The paper itself

Abstract

The amphibian model Xenopus, has been used extensively over the past century to study multiple aspects of cell and developmental biology. Xenopus offers advantages of a non-mammalian system, including high fecundity, external development, and simple housing requirements, with additional advantages of large embryos, highly conserved developmental processes, and close evolutionary relationship to higher vertebrates. There are two main species of Xenopus used in biomedical research, Xenopus laevis and Xenopus tropicalis; the common perception is that both species are excellent models for embryological and cell biological studies, but only Xenopus tropicalis is useful as a genetic model. The recent completion of the Xenopus laevis genome sequence combined with implementation of genome editing tools, such as TALENs (transcription activator-like effector nucleases) and CRISPR-Cas (clustered regularly interspaced short palindromic repeats-CRISPR associated nucleases), greatly facilitates the use of both Xenopus laevis and Xenopus tropicalis for understanding gene function in development and disease. In this paper, we review recent advances made in Xenopus laevis and Xenopus tropicalis with TALENs and CRISPR-Cas and discuss the various approaches that have been used to generate knockout and knock-in animals in both species. These advances show that both Xenopus species are useful for genetic approaches and in particular counters the notion that Xenopus laevis is not amenable to genetic manipulations.

Indexed as

Disease Models, AnimalAnimal HusbandryAnimalsBase PairingCRISPR-Cas SystemsGene EditingGene Knock-In TechniquesGene Knockout TechniquesGenomeHumansLaboratory Animal ScienceSelective BreedingTetraploidyTranscription Activator-Like Effector NucleasesXenopusXenopus laevisTranscription Activator-Like Effector NucleasesCRISPR-CasHuman disease modelJ strainKnock-inTALENsXenopus laevisXenopus tropicalis

Identifiers

PMID27109192
PMCPMC5074924
OpenAlexW2339609698

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.