Evidence map›Paper›PMID 27108700›Full record

ArticleNature communications2016

Foldamer-mediated manipulation of a pre-amyloid toxin.

Sunil Kumar, Melissa Birol, Diana E Schlamadinger, Slawomir P Wojcik, Elizabeth Rhoades, Andrew D Miranker

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Article
  8. Review
  9. Defining the Neuropathological Aggresome acrossThe journal of physical chemistry. B · 2021
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Aromatic Foldamer Helices as α-Helix Extended Surface Mimetics.Chemistry (Weinheim an der Bergstrasse, Germany) · 2020
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Small molecule probes of protein aggregation.Current opinion in chemical biology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sunil KumarDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Melissa BirolDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Diana E SchlamadingerDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Slawomir P WojcikDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Elizabeth RhoadesDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Andrew D MirankerDepartment of Molecular Biophysics and Biochemistry, Yale University, 260 Whitney Avenue, New Haven, Connecticut 06520-8114, USA.
Whitney Museum of American Art · USYale University · US

Funding

An orderly approach to toxic mechanism by disorderly peptidesR01GM102815 · NIGMS · YALE UNIVERSITY · PI MIRANKER, ANDREW D., RHOADES, ELIZABETH · 2012 to 2015
$1.5M
Insight into pathological self assembly using alpha-helical mimeticsR01GM094693 · NIGMS · YALE UNIVERSITY · PI MIRANKER, ANDREW D. · 2011 to 2014
$1.2M
NIGMS NIH HHS R01 GM094693NIGMS NIH HHS R01 GM102815
6 · The paper itself

Abstract

Disordered proteins, such as those central to Alzheimer's and Parkinson's, are particularly intractable for structure-targeted therapeutic design. Here we demonstrate the capacity of a synthetic foldamer to capture structure in a disease relevant peptide. Oligoquinoline amides have a defined fold with a solvent-excluded core that is independent of its outwardly projected, derivatizable moieties. Islet amyloid polypeptide (IAPP) is a peptide central to β-cell pathology in type II diabetes. A tetraquinoline is presented that stabilizes a pre-amyloid, α-helical conformation of IAPP. This charged, dianionic compound is readily soluble in aqueous buffer, yet crosses biological membranes without cellular assistance: an unexpected capability that is a consequence of its ability to reversibly fold. The tetraquinoline docks specifically with intracellular IAPP and rescues β-cells from toxicity. Taken together, our work here supports the thesis that stabilizing non-toxic conformers of a plastic protein is a viable strategy for cytotoxic rescue addressable using oligoquinoline amides.

Indexed as

AmidesAnimalsCell LineDiabetes Mellitus, Type 2HumansInsulin-Secreting CellsIslet Amyloid PolypeptideMolecular StructureQuinolinesRatsAmidesIslet Amyloid PolypeptidequinolineQuinolines

Identifiers

PMID27108700
PMCPMC4848510
OpenAlexW2342482184

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.