Evidence map›Paper›PMID 27107939›Full record

ArticleCell host & microbe2016

Sequential Infection with Common Pathogens Promotes Human-like Immune Gene Expression and Altered Vaccine Response.

Tiffany A Reese, Kevin Bi, Amal Kambal, Ali Filali-Mouhim, Lalit K Beura, Matheus C Bürger, Bali Pulendran, Rafick-Pierre Sekaly, Stephen C Jameson, David Masopust and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed, 1 pooled it
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 1 synthesis or guideline pooled it, 241 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. A gavage-fomite based method to generate mouse models with natural microbiota.Journal of immunology (Baltimore, Md. : 1950) · 2026
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  12. Diverse Microbial Exposure Enhances CD8bioRxiv : the preprint server for biology · 2026
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  16. Review
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105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Tiffany A ReeseDepartments of Immunology and Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: tiffany.reese@utsouthwestern.edu.
Kevin BiDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, and Pediatric Hematology and Oncology, Children's Hospital, Boston, MA 02115, and the Broad Institute of Harvard and the Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Amal KambalDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Ali Filali-MouhimDepartment of Pathology, Case Western Reserve University, Cleveland, OH 44106, USA.
Lalit K BeuraDepartment of Microbiology and Immunology, Center for Immunology, University of Minnesota, Minneapolis, MN 55455, USA.
Matheus C BürgerDepartment of Clinical Analyses and Toxicology, School of Pharmaceutical Science at University of São Paulo, São Paulo 05508, Brazil.
Bali PulendranEmory Vaccine Center, Yerkes National Primate Research Center and Department of Pathology, Emory University, Atlanta, GA 30329, USA.
Rafick-Pierre SekalyDepartment of Pathology, Case Western Reserve University, Cleveland, OH 44106, USA.
Stephen C JamesonDepartment of Laboratory Medicine and Pathology, Center for Immunology, University of Minnesota, Minneapolis, MN 55455, USA.
David MasopustDepartment of Microbiology and Immunology, Center for Immunology, University of Minnesota, Minneapolis, MN 55455, USA.
W Nicholas HainingDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, and Pediatric Hematology and Oncology, Children's Hospital, Boston, MA 02115, and the Broad Institute of Harvard and the Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Herbert W VirginDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: virgin@wustl.edu.
University of Minnesota · USCase Western Reserve University · USDana-Farber Cancer Institute · USWashington University in St. Louis · USEmory University · USThe University of Texas Southwestern Medical Center · USUniversidade de São Paulo · BR

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Jeffrey S. Miller · 1998 to 2026
$100.4M
VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Viral Discovery in Rheumatoid ArthritisP30AR048335 · NIAMS · WASHINGTON UNIVERSITY · PI YOKOYAMA, WAYNE M. · 2001 to 2015
$8.9M
MICROBES, DENDRITIC CELL SUBSETS AND T-CELL IMMUNITYR01AI048638 · NIAID · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2001 to 2024
$4.5M
Understanding the Role of Mucosal Antigen Presenting Cells in Regulating Immune ResponseR37AI048638 · NIAID · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2009 to 2018
$4.0M
Polarizing T Cell Responses in vivo With Dendritic CellsR37DK057665 · NIDDK · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2010 to 2019
$3.9M
The enteric microbiome in treated and progressive HIV infectionR01DK101354 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI KWON, DOUGLAS, VIRGIN, HERBERT W · 2014 to 2018
$3.7M
PRIMATE INFECTIOUS DISEASE RESOURCE (PIDR)R24OD019793 · OD · WASHINGTON UNIVERSITY · PI BOHM, RUDOLF PAUL, WANG, DAVID · 2015 to 2018
$3.1M
Inflammation and the vaginal metagenome in HIV acquisitionR01AI111918 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI KWON, DOUGLAS, VIRGIN, HERBERT W · 2014 to 2017
$2.5M
METAGENOMICS OF ENTERIC DISEASE IN SIV-INFECTED AND UNINFECTED MACAQUESR01OD011170 · OD · WASHINGTON UNIVERSITY · PI BAROUCH, DAN H., VIRGIN, HERBERT W · 2012 to 2014
$2.3M
Microbes, Dendritic Cell Subsets and T-Cell ImmunityR56AI048638 · NIAID · EMORY UNIVERSITY · PI PULENDRAN, BALI · 2008 to 2008
$440k
NCI NIH HHS P30 CA077598NIAID NIH HHS R01 AI111918NIAID NIH HHS R37 AI048638NIAID NIH HHS R56 AI048638NIAID NIH HHS U19 AI057266NIAMS NIH HHS P30 AR048335NIDDK NIH HHS R01 DK101354NIDDK NIH HHS R37 DK057665NIH HHS P51 OD011132NIH HHS R01 OD011170NIH HHS R24 OD019793
6 · The paper itself

Abstract

Immune responses differ between laboratory mice and humans. Chronic infection with viruses and parasites are common in humans, but are absent in laboratory mice, and thus represent potential contributors to inter-species differences in immunity. To test this, we sequentially infected laboratory mice with herpesviruses, influenza, and an intestinal helminth and compared their blood immune signatures to mock-infected mice before and after vaccination against yellow fever virus (YFV-17D). Sequential infection altered pre- and post-vaccination gene expression, cytokines, and antibodies in blood. Sequential pathogen exposure induced gene signatures that recapitulated those seen in blood from pet store-raised versus laboratory mice, and adult versus cord blood in humans. Therefore, basal and vaccine-induced murine immune responses are altered by infection with agents common outside of barrier facilities. This raises the possibility that we can improve mouse models of vaccination and immunity by selective microbial exposure of laboratory animals to mimic that of humans.

Indexed as

AnimalsAntibodiesAntibodies, ViralCoinfectionCytokinesDisease Models, AnimalFetal BloodGene ExpressionHelminthiasisHerpesviridaeHerpesviridae InfectionsHumansImmunity, InnateImmunoglobulin GInfluenza, HumanIntestinal Diseases, ParasiticAntibodiesAntibodies, ViralCytokinesImmunoglobulin GYellow Fever Vaccine

Identifiers

PMID27107939
PMCPMC4896745
OpenAlexW2342276553

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.