Evidence map›Paper›PMID 27107590›Full record

ArticlePediatric rheumatology online journal2016

Association of juvenile idiopathic arthritis with PTPN22 rs2476601 is specific to females in a Greek population.

G N Goulielmos, R C Chiaroni-Clarke, D G Dimopoulou, M I Zervou, M Trachana, P Pratsidou-Gertsi, A Garyfallos, J A Ellis

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Pediatric rheumatology online journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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  6. Sex Differences in Pediatric Rheumatology.Clinical reviews in allergy & immunology · 2019
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  7. Article
  8. The role of gene polymorphisms in endometriosis.Molecular medicine reports · 2017
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  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

G N GoulielmosLaboratory of Molecular Medicine and Human Genetics, Department of Medicine, Medical School of Crete, Heraklion, Greece.
R C Chiaroni-ClarkeGenes, Environment and Complex Disease, Murdoch Childrens Research Institute, Parkville, Victoria, 3052, Australia.
D G DimopoulouRheumatology Unit, 4th Department of Internal Medicine, Aristotle University of Thessaloniki, Hippocration Hospital, Thessaloniki, Greece.
M I ZervouLaboratory of Molecular Medicine and Human Genetics, Department of Medicine, Medical School of Crete, Heraklion, Greece.
M TrachanaPediatric Immunology and Rheumatology Referral Center, 1st Department of Pediatrics, Aristotle University, Thessaloniki, Greece.
P Pratsidou-GertsiPediatric Immunology and Rheumatology Referral Center, 1st Department of Pediatrics, Aristotle University, Thessaloniki, Greece.
A GaryfallosRheumatology Unit, 4th Department of Internal Medicine, Aristotle University of Thessaloniki, Hippocration Hospital, Thessaloniki, Greece.
J A EllisGenes, Environment and Complex Disease, Murdoch Childrens Research Institute, Parkville, Victoria, 3052, Australia. justine.ellis@mcri.edu.au.
Aristotle University of Thessaloniki · GRHippocration General Hospital · GRUniversity of Crete · GRMurdoch Children's Research Institute · AUUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundJuvenile idiopathic arthritis (JIA) is an autoimmune disease characterized by persistent chronic arthritis. Disease risk is believed to be influenced by both genetic and environmental factors. It is well established that the PTPN22 single nucleotide polymorphism (SNP) rs2476601 is associated with JIA susceptibility. It was recently reported in an Australian study that this association is restricted to females and is not observed in males. A significant source of inconsistency amongst the literature on autoimmune disease susceptibility genes stems from an inability to replicate genetic findings across different racial or ethnic groups. We therefore attempted to generate further evidence of the female-specific association of rs2476601 in a homogeneous Greek population.

findingsWe genotyped rs2476601 in 128 Caucasian JIA patients (70.3 % female) and 221 healthy controls (28.1 % female) from Northern Greece. Overall, PTPN22 was associated with increased risk of JIA in this Greek sample (OR = 2.3, 95 % CI 1.1 - 5.1, p = 0.038). Sex-stratified analyses showed that, once again, the risk association was restricted to females (Female: OR = 19.9, 95 % CI 1.2 - 342, p = 0.0016; Male: OR = 1.1, 95 % CI 0.3 - 3.1, p = 0.94) supporting the prior findings.

conclusionsOur data demonstrates that this sex-specific pattern of association is broadly applicable to different populations, and provides further impetus to undertake mechanistic studies to understand the impact of sex on PTPN22 in JIA.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAllelesArthritis, JuvenileDNAFemaleGene FrequencyGenotypeGreeceHumansIncidenceMaleProtein Tyrosine Phosphatase, Non-Receptor Type 22Retrospective StudiesRisk FactorsSex FactorsDNAProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humanGene polymorphismGenetic associationJuvenile Idiopathic Arthritis (JIA)Protein tyrosine phosphatase nonreceptor 22 (PTPN22) geneSex

Identifiers

PMID27107590
PMCPMC4842296
OpenAlexW2337757849

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.