ArticlePlant biotechnology journal2016
QTL-seq for rapid identification of candidate genes for 100-seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea.
Article in Plant biotechnology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.
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110 citing papers in PubMed, 201 citations in OpenAlex.
- Breeding for next-generation biotic stress-tolerant pigeonpea for sustainable food legume production.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- Pan-transcriptome analysis of diverse chickpea accessions reveals specific expression patterns and genetic variations associated with agronomic traits.Plant molecular biology · 2026Article
- Genomic dissection of Botrytis grey mould resistance in chickpea (Cicer arietinum L.) using QTL-seq approach.Plant cell reports · 2026Article
- QTL-seq analysis of seed protein quantity and quality traits in two soybean recombinant inbred line populations.Frontiers in plant science · 2026Article
- Identification and validation of QTLs associated with resistance to tomato leaf curl Bangalore virus disease using QTL-seq analysis in tomato (Solanum spp.).Molecular biology reports · 2025Article
- Identification of candidate genes for watermelon (Molecular breeding : new strategies in plant improvement · 2025Article
- A 294 kb deletion causes reduced leaflet size and biomass in pigeonpea.Plant cell reports · 2025Article
- Advancing Chickpea Breeding: Omics Insights for Targeted Abiotic Stress Mitigation and Genetic Enhancement.Biochemical genetics · 2025Review
- A glycogen synthase kinase-3 gene enhances grain yield heterosis in semi-dwarf rapeseed.Plant molecular biology · 2025Article
- Identification of Genomic Regions Associated with Differences in Flowering Time and Inflorescence Architecture betweenInternational journal of molecular sciences · 2024Article
- Selection for Phytophthora Root Rot Resistance in Chickpea Crosses Affects Yield Potential of Chickpea ×Plants (Basel, Switzerland) · 2024Article
- Morphological and Genomic Differences in the Italian Populations ofPlants (Basel, Switzerland) · 2024Article
- Delineation of genes for a major QTL governing heat stress tolerance in chickpea.Plant molecular biology · 2024Article
- Superior haplotypes of key drought-responsive genes reveal opportunities for the development of climate-resilient rice varieties.Communications biology · 2024Article
- Zinc finger knuckle genes are associated with tolerance to drought and dehydration in chickpea (Frontiers in plant science · 2024Article
- Deploying QTL-seq rapid identification and separation of the major QTLs of tassel branch number for fine-mapping in advanced maize populations.Molecular breeding : new strategies in plant improvement · 2023Article
- BSA-Seq for the Identification of Major Genes for EPN in Rice.International journal of molecular sciences · 2023Article
- Mitochondrial Inner Membrane ABC Transporter Bcmdl1 Is Involved in Conidial Germination, Virulence, and Resistance to Anilinopyrimidine Fungicides in Botrytis cinerea.Microbiology spectrum · 2023Article
- Mapping and candidate gene analysis of clustered bud on the main inflorescence in Brassica napus L.BMC plant biology · 2023Article
- The developmental dynamics in cool season legumes with focus on chickpea.Plant molecular biology · 2023Review
50 more citing papers are in PubMed but not listed here.
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Authors and funding
13 authors at 4 institutions in 3 countries.
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Abstract
Terminal drought is a major constraint to chickpea productivity. Two component traits responsible for reduction in yield under drought stress include reduction in seeds size and root length/root density. QTL-seq approach, therefore, was used to identify candidate genomic regions for 100-seed weight (100SDW) and total dry root weight to total plant dry weight ratio (RTR) under rainfed conditions. Genomewide SNP profiling of extreme phenotypic bulks from the ICC 4958 × ICC 1882 population identified two significant genomic regions, one on CaLG01 (1.08 Mb) and another on CaLG04 (2.7 Mb) linkage groups for 100SDW. Similarly, one significant genomic region on CaLG04 (1.10 Mb) was identified for RTR. Comprehensive analysis revealed four and five putative candidate genes associated with 100SDW and RTR, respectively. Subsequently, two genes (Ca_04364 and Ca_04607) for 100SDW and one gene (Ca_04586) for RTR were validated using CAPS/dCAPS markers. Identified candidate genomic regions and genes may be useful for molecular breeding for chickpea improvement.
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