Evidence map›Paper›PMID 27106478›Full record

ArticlePlant molecular biology2016

Characterization of OfWRKY3, a transcription factor that positively regulates the carotenoid cleavage dioxygenase gene OfCCD4 in Osmanthus fragrans.

Yuanji Han, Miao Wu, Liya Cao, Wangjun Yuan, Meifang Dong, Xiaohui Wang, Weicai Chen, Fude Shang

Abstract read
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In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 116 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yuanji HanSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Miao WuSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Liya CaoSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Wangjun YuanSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Meifang DongSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Xiaohui WangSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Weicai ChenSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China.
Fude ShangSchool of Life Sciences, State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, Laboratory of Plant Germplasm and Genetic Engineering, Henan University, Kaifeng, 475004, Henan, China. fudeshang@henu.edu.cn.
Henan University · CNState Key Laboratory of Cotton Biology

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sweet osmanthus carotenoid cleavage dioxygenase 4 (OfCCD4) cleaves carotenoids such as β-carotene and zeaxanthin to yield β-ionone. OfCCD4 is a member of the CCD gene family, and its promoter contains a W-box palindrome with two reversely oriented TGAC repeats, which are the proposed binding sites of WRKY transcription factors. We isolated three WRKY cDNAs from the petal of Osmanthus fragrans. One of them, OfWRKY3, encodes a protein containing two WRKY domains and two zinc finger motifs. OfWRKY3 and OfCCD4 had nearly identical expression profile in petals of 'Dangui' and 'Yingui' at different flowering stages and showed similar expression patterns in petals treated by salicylic acid, jasmonic acid and abscisic acid. Activation of OfCCD4pro:GUS by OfWRKY3 was detected in coinfiltrated tobacco leaves and very weak GUS activity was detected in control tissues, indicating that OfWRKY3 can interact with the OfCCD4 promoter. Yeast one-hybrid and electrophoretic mobility shift assay showed that OfWRKY3 was able to bind to the W-box palindrome motif present in the OfCCD4 promoter. These results suggest that OfWRKY3 is a positive regulator of the OfCCD4 gene, and might partly account for the biosynthesis of β-ionone in sweet osmanthus.

Indexed as

Genes, PlantAmino Acid SequenceBase SequenceCarotenoidsCell NucleusDioxygenasesDNA, ComplementaryDNA, PlantFlowersGene Expression ProfilingGene Expression Regulation, PlantNicotianaOleaceaePlant LeavesPlant ProteinsPromoter Regions, GeneticCarotenoidsDioxygenasesDNA, ComplementaryDNA, PlantPlant ProteinsRNA, MessengerTranscription FactorsCarotenoid cleavage dioxygenaseOsmanthus fragransWRKY transcription factor

Identifiers

PMID27106478
OpenAlexW2340238337

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.