Evidence map›Paper›PMID 27106293›Full record

ArticleNeurogenetics2016

Genetic fitness and selection intensity in a population affected with high-incidence spinocerebellar ataxia type 1.

Fedor A Platonov, Kathrin Tyryshkin, Dmitriy G Tikhonov, Tatyana S Neustroyeva, Tatyana M Sivtseva, Natalya V Yakovleva, Valerian P Nikolaev, Oksana G Sidorova, Sardana K Kononova, Lev G Goldfarb and 1 more

Open access · greenAbstract read
In one paragraph

Article in Neurogenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Genetics, Mechanisms, and Therapeutic Progress in Polyglutamine Spinocerebellar Ataxias.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Fedor A PlatonovInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Kathrin TyryshkinDepartment of Pathology and Molecular Medicine, Queen's University, Kingston, ON, K7L 3N6, Canada.
Dmitriy G TikhonovInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Tatyana S NeustroyevaInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Tatyana M SivtsevaInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Natalya V YakovlevaInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Valerian P NikolaevInstitute of Health, M.K. Ammosov North-Eastern Federal University, Yakutsk, 677010, The Russian Federation.
Oksana G SidorovaCenter for Integrated Medical Research, Academy of Medical Sciences, Yakutsk, 677010, The Russian Federation.
Sardana K KononovaCenter for Integrated Medical Research, Academy of Medical Sciences, Yakutsk, 677010, The Russian Federation.
Lev G GoldfarbNational Institute of Neurological Disorder and Stoke, NIH, Bethesda, MD, 20892, USA. GoldfarbL@ninds.nih.gov.
Neil M RenwickDepartment of Pathology and Molecular Medicine, Queen's University, Kingston, ON, K7L 3N6, Canada.
North-Eastern Federal University · RUQueen's University · CANational Institute of Neurological Disorders and Stroke · US

Funding

Genotype-phenotype In Movement &Neuromuscular DisordersZ01NS002973 · NINDS · NEUROLOGICAL DISORDERS AND STROKE · PI GOLDFARB, LEV G · 1999 to 2008
$2.1M
Intramural NIH HHS Z01 NS002973
6 · The paper itself

Abstract

Spinocerebellar ataxia type 1 (SCA1) is the major and likely the only type of autosomal dominant cerebellar ataxia in the Sakha (Yakut) people of Eastern Siberia. The prevalence rate of SCA1 has doubled over the past 21 years peaking at 46 cases per 100,000 rural population. The age at death correlates closely with the number of CAG triplet repeats in the mutant ATXN1 gene (r = -0.81); most patients with low-medium (39-55) repeat numbers survived until the end of reproductive age. The number of CAG repeats expands in meiosis, particularly in paternal transmissions; the average total increase in intergenerational transmissions in our cohort was estimated at 1.6 CAG repeats. The fertility rates of heterozygous carriers of 39-55 CAG repeats in women were no different from those of the general Sakha population. Overall, the survival of mutation carriers through reproductive age, unaltered fertility rates, low childhood mortality in SCA1-affected families, and intergenerational transmission of increasing numbers of CAG repeats in the ATXN1 gene indicate that SCA1 in the Sakha population will be maintained at high prevalence levels. The low (0.19) Crow's index of total selection intensity in our SCA1 cohort implies that this mutation is unlikely to be eliminated through natural selection alone.

Indexed as

Genetic FitnessSelection, GeneticAdultAgedAged, 80 and overAtaxin-1Birth RateCohort StudiesFemaleHeterozygoteHumansIncidenceMaleMiddle AgedMutationSiberiaAtaxin-1ATXN1 protein, humanATXN1 geneCrow’s indexGenetic fitnessNortheast SiberiaSakha (Yakut) populationSpinocerebellar ataxia type 1

Identifiers

PMID27106293
PMCPMC5262524
OpenAlexW2336300796

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.