Evidence map›Paper›PMID 27105866›Full record

ArticleJournal of molecular neuroscience : MN2016

New Mutations in NEB Gene Discovered by Targeted Next-Generation Sequencing in Nemaline Myopathy Italian Patients.

Daniela Piga, Francesca Magri, Dario Ronchi, Stefania Corti, Denise Cassandrini, Eugenio Mercuri, Giorgio Tasca, Enrico Bertini, Fabiana Fattori, Antonio Toscano and 13 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular neuroscience : MN, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Case report: Homozygous variants ofFrontiers in genetics · 2023
    Article
  2. Article
  3. Article
  4. Expanding the spectrum of congenital myopathies: prenatal onset with extreme hyperextension of the neck.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2021
    Article
  5. Review
  6. Bioinformatics Analysis and High-Throughput Sequencing to Identify Differentially Expressed Genes in Nebulin Gene (NEB) Mutations Mice.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 1 country.

Daniela PigaDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy.
Francesca MagriDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy.
Dario RonchiDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy.
Stefania CortiDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy.
Denise CassandriniMolecular Medicine Unit, IRCCS Stella Maris, Pisa, Italy.
Eugenio MercuriDepartment of Pediatrics, Policlinico Gemelli, Università Cattolica Sacro Cuore, Roma, Italy.
Giorgio TascaDon Carlo Gnocchi Onlus Foundation, Milan, Italy.
Enrico BertiniDepartment of Laboratories, Unit of Molecular Medicine for Neuromuscular and Neurodegenerative Disorders, Bambino Gesù Children's Hospital, Rome, Italy.
Fabiana FattoriDepartment of Laboratories, Unit of Molecular Medicine for Neuromuscular and Neurodegenerative Disorders, Bambino Gesù Children's Hospital, Rome, Italy.
Antonio ToscanoDepartment of Neurosciences, Psychiatry and Anesthesiology, University of Messina, AOU Policlinico G. Martino, Messina, Italy.
Sonia MessinaDepartment of Neurosciences, Psychiatry and Anesthesiology, University of Messina, AOU Policlinico G. Martino, Messina, Italy.
Isabella MoroniPediatric, Neuromuscular Diseases and Neuroimmunology Units, The Foundation "Carlo Besta" IRCCS Neurological Institute, Milan, Italy.
Marina MoraPediatric, Neuromuscular Diseases and Neuroimmunology Units, The Foundation "Carlo Besta" IRCCS Neurological Institute, Milan, Italy.
Maurizio MoggioDino Ferrari Centre, Neuromuscular Unit, IRCCS Foundation Cà Granda Ospedale Maggiore Policlinico, University of Milan, Milan, Italy.
Irene ColomboDino Ferrari Centre, Neuromuscular Unit, IRCCS Foundation Cà Granda Ospedale Maggiore Policlinico, University of Milan, Milan, Italy.
Teresa GiuglianoDepartment of Biochemistry, Biophysics and General Pathology, Second University of Naples, Naples, Italy.
Marika PaneDepartment of Pediatrics, Policlinico Gemelli, Università Cattolica Sacro Cuore, Roma, Italy.
Chiara FiorilloCenter of Myology and Neurodegenerative Diseases, Giannina Gaslini Institute, Genova, Italy.
Adele D'AmicoDepartment of Laboratories, Unit of Molecular Medicine for Neuromuscular and Neurodegenerative Disorders, Bambino Gesù Children's Hospital, Rome, Italy.
Claudio BrunoCenter of Myology and Neurodegenerative Diseases, Giannina Gaslini Institute, Genova, Italy.
Vincenzo NigroDepartment of Biochemistry, Biophysics and General Pathology, Second University of Naples, Naples, Italy.
Nereo BresolinDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy.
Giacomo Pietro ComiDino Ferrari Centre, Department of Pathophysiology and Transplantation (DEPT), University of Milan, Neurology Unit, I.R.C.C.S. Foundation Ca' Granda, Ospedale Maggiore Policlinico, Via F. Sforza 35, 20122, Milan, Italy. giacomo.comi@unimi.it.
Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITUniversity of Milan · ITBambino Gesù Children's Hospital · ITIstituto Giannina Gaslini · ITUniversità Cattolica del Sacro Cuore · ITUniversity of Messina · ITDon Carlo Gnocchi Foundation · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITUniversity of Campania "Luigi Vanvitelli" · ITUniversity of Naples Federico II · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nemaline myopathy represents a group of clinically and genetically heterogeneous neuromuscular disorders. Different clinical-genetic entities have been characterized in the last few years, with implications for diagnostics and genetic counseling. Fifty percent of nemaline myopathy forms are due to NEB mutations, but genetic analysis of this large and complex gene by Sanger sequencing is time consuming and expensive. We selected 10 Italian patients with clinical and biopsy features suggestive for nemaline myopathy and negative for ACTA1, TPM2 and TPM3 mutations. We applied a targeted next-generation sequencing strategy designed to analyse NEB coding regions, the relative full introns and the promoter. We also evaluated copy number variations (by CGH array) and transcriptional changes by RNA Sanger sequencing, whenever possible. This combined strategy revealed 11 likely pathogenic variants in 8 of 10 patients. The molecular diagnosis was fully achieved in 3 of 8 patients, while only one heterozygous mutation was observed in 5 subjects. This approach revealed to be a fast and cost-effective way to analyse the large NEB gene in a small group of patients and might be promising for the detection of pathological variants of other genes featuring large coding regions and lacking mutational hotspots.

Indexed as

MutationChildDNA Copy Number VariationsGenetic TestingHeterozygoteHigh-Throughput Nucleotide SequencingHumansInfantIntronsMuscle ProteinsMyopathies, NemalinePromoter Regions, GeneticSequence Analysis, DNAYoung AdultMuscle ProteinsnebulinNEB mutationsNemaline myopathyNext-generation sequencing

Identifiers

PMID27105866
OpenAlexW2341083392

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.