Evidence map›Paper›PMID 27105138›Full record

ArticleTranscription2016

RNA polymerase II acts as a selective sensor for DNA lesions and endogenous DNA modifications.

Ji Hyun Shin, Liang Xu, Dong Wang

Open access · bronzeAbstract read
In one paragraph

Article in Transcription, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Mechanism of RNA polymerase II stalling by DNA alkylation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Epigenetic DNA Modification NJournal of the American Chemical Society · 2017
    Article
  8. Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ji Hyun Shina Department of Cellular and Molecular Medicine , School of Medicine, Skaggs School of Pharmacy and Pharmaceutical Sciences, The University of California , San Diego, La Jolla , CA , USA.
Liang Xua Department of Cellular and Molecular Medicine , School of Medicine, Skaggs School of Pharmacy and Pharmaceutical Sciences, The University of California , San Diego, La Jolla , CA , USA.
Dong Wanga Department of Cellular and Molecular Medicine , School of Medicine, Skaggs School of Pharmacy and Pharmaceutical Sciences, The University of California , San Diego, La Jolla , CA , USA.
University of California, San Diego · USUniversity of Montana · US

Funding

Molecular Mechanisms for DNA Damage Processing by Transcription MachineryR01GM102362 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WANG, DONG · 2013 to 2025
$5.6M
NIGMS NIH HHS R01 GM102362
6 · The paper itself

Abstract

During transcription elongation, RNA polymerase II (pol II) travels along the DNA template across thousands to millions of nucleotides and accurately synthesizes the complementary RNA transcripts. Apart from its canonical function as a key enzyme for DNA-dependent RNA synthesis, pol II also functions as a selective sensor to recognize DNA lesions or epigenetic modifications.

Indexed as

DNADNA DamageEpigenesis, GeneticHumansModels, MolecularRNA, MessengerRNA Polymerase IIDNARNA, MessengerRNA Polymerase IIDNA lesionsDNA modificationsepi-DNA recognition loopRNA polymerase IIsensor

Identifiers

PMID27105138
PMCPMC4984683
OpenAlexW2339771552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.