Evidence map›Paper›PMID 27104882›Full record

ArticleCell cycle (Georgetown, Tex.)2016

Unraveling molecular effects of ADAR1 overexpression in HEK293T cells by label-free quantitative proteomics.

Jisheng Guo, Xiaoyue Wang, Xin Lü, Ruirui Jing, Junqiang Li, CuiLing Li, Daoguang Wang, Baibin Bi, Xinjun Chen, Fengqin Wang and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Jisheng Guoa Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Xiaoyue Wanga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Xin Lüa Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Ruirui Jinga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Junqiang Lia Cancer Research Center, Shandong University School of Medicine , Jinan , China.
CuiLing Lia Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Daoguang Wanga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Baibin Bia Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Xinjun Chena Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Fengqin Wanga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Shengnan Suna Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Jing Gonga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Kazem M Azadzoib Departments of Surgery and Urology , VA Boston Healthcare System, Boston University School of Medicine , Boston , MA , USA.
Jing-Hua Yanga Cancer Research Center, Shandong University School of Medicine , Jinan , China.
Shandong University · CNBoston University · USVA Boston Healthcare System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ADAR1 is a double-stranded RNA (dsRNA) editing enzyme that specifically converts adenosine to inosine. ADAR1 is ubiquitously expressed in eukaryotes and participate in various cellular processes such as differentiation, proliferation and immune responses. We report here a new proteomics study of HEK293T cells with and without ADAR1 overexpression. The up- and down-regulated proteins by ADAR1 overexpression are identified by liquid chromatography-tandem mass spectrometry (LC-MS/MS) followed by label-free protein quantification. Totally 1,495 proteins (FDR < 0.01) are identified, among which 211 are up- and 159 are down-regulated for at least 1.5-fold (n = 3, p < 0.05). Gene ontology analysis reveals that these ADAR1-regulated proteins are involved in protein translation and cell cycle regulation. Bioinformatics analysis identifies a closely related network consistent for the protein translation machinery and a tightly connected network through proliferating cell nuclear antigen (PCNA)-interactions. Up-regulation of the proteins in the PCNA-mediated cell proliferation network is confirmed by Western blotting. In addition, ADAR1 overexpression is confirmed to increase cell proliferation in HEK293T cells and A549 cells. We conclude that ADAR1 overexpression modulates the protein translation and cell cycle networks through PCNA-mediated protein-protein interaction to promote cell proliferation in HEK293 cells.

Indexed as

Gene Regulatory NetworksProtein Interaction MappingAdenosine DeaminaseBase SequenceCell CycleDNA Repair EnzymesGene Expression RegulationGene OntologyHEK293 CellsHumansKaryopherinsKu AutoantigenMolecular Sequence AnnotationNuclear ProteinsProliferating Cell Nuclear AntigenProteomicsADAR protein, humanAdenosine DeaminaseDNA Repair EnzymesKaryopherinsKu AutoantigenNuclear ProteinsProliferating Cell Nuclear AntigenPRPF19 protein, humanRNA-Binding ProteinsRNA Splicing FactorsXPO5 protein, humanXRCC5 protein, humanADAR1biotechnologycell proliferationmass spectrometryprotein translationproteomics

Identifiers

PMID27104882
PMCPMC4934060
OpenAlexW2337692749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.