Evidence map›Paper›PMID 27104361›Full record

ArticleCell cycle (Georgetown, Tex.)2016

Acetylation regulates DNA repair mechanisms in human cells.

Dorota Piekna-Przybylska, Robert A Bambara, Lata Balakrishnan

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Interplay between altered metabolism and DNA damage and repair in ovarian cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2024
    Review
  4. Correlating histone acetylation with nucleosome core particle dynamics and function.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. DNA Damage Stress: Cui Prodest?International journal of molecular sciences · 2019
    Review
  14. CREBBP and p300 lysine acetyl transferases in the DNA damage response.Cellular and molecular life sciences : CMLS · 2018
    Review
  15. Article
  16. Fine-tuning DNA repair by protein acetylation.Cell cycle (Georgetown, Tex.) · 2016
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Dorota Piekna-Przybylskaa Department of Microbiology and Immunology , School of Medicine and Dentistry, University of Rochester , Rochester , NY , USA.
Robert A Bambaraa Department of Microbiology and Immunology , School of Medicine and Dentistry, University of Rochester , Rochester , NY , USA.
Lata Balakrishnanb Department of Biology , Indiana University-Purdue University Indianapolis , Indianapolis , IN , USA.
University of Rochester · USIndiana University – Purdue University Indianapolis · US

Funding

Regulating Pathways and Fidelity of DNA Replication and Repair by AcetylationR00GM098328 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI BALAKRISHNAN, LATA · 2014 to 2016
$746k
REGULATING GENOME FIDELITY AND CANCER PROGRESSIONR21CA176249 · NCI · UNIVERSITY OF ROCHESTER · PI BAMBARA, ROBERT A · 2014 to 2015
$367k
NCI NIH HHS R21 CA176249NIGMS NIH HHS R00 GM098328
6 · The paper itself

Abstract

The p300-mediated acetylation of enzymes involved in DNA repair and replication has been previously shown to stimulate or inhibit their activities in reconstituted systems. To explore the role of acetylation on DNA repair in cells we constructed plasmid substrates carrying inactivating damages in the EGFP reporter gene, which should be repaired in cells through DNA mismatch repair (MMR) or base excision repair (BER) mechanisms. We analyzed efficiency of repair within these plasmid substrates in cells exposed to deacetylase and acetyltransferase inhibitors, and also in cells deficient in p300 acetyltransferase. Our results indicate that protein acetylation improves DNA mismatch repair in MMR-proficient HeLa cells and also in MMR-deficient HCT116 cells. Moreover, results suggest that stimulated repair of mismatches in MMR-deficient HCT116 cells is done though a strand-displacement synthesis mechanism described previously for Okazaki fragments maturation and also for the EXOI-independent pathway of MMR. Loss of p300 reduced repair of mismatches in MMR-deficient cells, but did not have evident effects on BER mechanisms, including the long patch BER pathway. Hypoacetylation of the cells in the presence of acetyltransferase inhibitor, garcinol generally reduced efficiency of BER of 8-oxoG damage, indicating that some steps in the pathway are stimulated by acetylation.

Indexed as

DNA Mismatch RepairDNA RepairDNA ReplicationProtein Processing, Post-TranslationalAcetylationAmino Acid SequenceBase Pair MismatchBase SequenceDNAEnzyme InhibitorsGenes, ReporterGreen Fluorescent ProteinsGuanineHCT116 CellsHeLa CellsHumans7,8-dihydro-8-oxoguanineDNAenhanced green fluorescent proteinEnzyme InhibitorsgarcinolGreen Fluorescent ProteinsGuaninep300-CBP-Associated Factorp300-CBP Transcription FactorsTerpenesAcetylationBERDNA repairMMRp300

Identifiers

PMID27104361
PMCPMC4934069
OpenAlexW2341857359

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.