Evidence map›Paper›PMID 27103636›Full record

ArticleMolecular & cellular proteomics : MCP2016

Apolipoprotein E*4 (APOE*4) Genotype Is Associated with Altered Levels of Glutamate Signaling Proteins and Synaptic Coexpression Networks in the Prefrontal Cortex in Mild to Moderate Alzheimer Disease.

Robert A Sweet, Matthew L MacDonald, Caitlin M Kirkwood, Ying Ding, Tadhg Schempf, Jackie Jones-Laughner, Julia Kofler, Milos D Ikonomovic, Oscar L Lopez, Megan E Garver and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Proteins linking APOE ɛ4 with Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
  9. Article
  10. Article
  11. Heliyon · 2023
    Article
  12. Article
  13. Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Robert A SweetFrom the Departments of ‡Psychiatry, **Neurology, and ‡‡VISN 4 Mental Illness Research, Education and Clinical Center (MIRECC) and sweetra@upmc.edu.
Matthew L MacDonaldFrom the Departments of ‡Psychiatry.
Caitlin M KirkwoodFrom the Departments of ‡Psychiatry.
Ying Ding§Biostatistics.
Tadhg SchempfFrom the Departments of ‡Psychiatry.
Jackie Jones-Laughner¶Cell Biology.
Julia Kofler‖Pathology.
Milos D Ikonomovic**Neurology, and §§Geriatric Research, Education and Clinical Center (GRECC), VA Pittsburgh Healthcare System, Pittsburgh, PA.
Oscar L LopezFrom the Departments of ‡Psychiatry, **Neurology, and.
Megan E GarverFrom the Departments of ‡Psychiatry.
Nicholas F Fitz¶¶Environmental & Occupational Health, University of Pittsburgh, Pittsburgh, PA;
Radosveta Koldamova¶¶Environmental & Occupational Health, University of Pittsburgh, Pittsburgh, PA;
Nathan A Yates¶Cell Biology.
University of Pittsburgh · USMental Illness Research, Education and Clinical Centers · USVA Pittsburgh Healthcare System · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 1985 to 2019
$43.0M
TAU, AB, SYNUCLEIN AND NITRATIVE/OXIDATIVE DAMAGE IN MCIP01AG014449 · NIA · UNIVERSITY OF PITTSBURGH · PI IKONOMOVIC, MILOS D · 1997 to 2024
$39.7M
Prediction of Psychosis in Alzheimer DiseaseR01AG027224 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWEET, ROBERT A · 2007 to 2021
$10.8M
Training for Transformative Discovery in PsychiatryT32MH016804 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWEET, ROBERT A · 1985 to 2025
$6.2M
LXR and human ApoE isoform effects on AD phenotype: in vitro and in vivo modelsR01AG037481 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KOLDAMOVA, RADOSVETA · 2011 to 2015
$1.8M
ATP1A3 Induced Alterations to Glutamate Signaling Protein Networks in SchizophreniaK01MH107756 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MACDONALD, MATTHEW L · 2015 to 2018
$631k
Peripheral & Brain Cholesterol Metabolism in Neurodegenerative Mouse ModelsK01AG044490 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FITZ, NICHOLAS FRANCIS · 2014 to 2018
$463k
Novel and Robust Methods for Differential Protein Network Analysis of Proteomics Data in Schizophrenia ResearchR03MH108849 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DING, YING · 2016 to 2017
$145k
Cortical Synapses and Psychosis in ADI01BX000452 · VA · VETERANS HEALTH ADMINISTRATION · PI SWEET, ROBERT A · 2009 to 2017
–
BLRD VA I01 BX000452NCI NIH HHS P30 CA047904NIA NIH HHS K01 AG044490NIA NIH HHS P01 AG014449NIA NIH HHS P50 AG005133NIA NIH HHS R01 AG027224NIA NIH HHS R01 AG037481NIMH NIH HHS K01 MH107756NIMH NIH HHS R03 MH108849NIMH NIH HHS T32 MH016804
6 · The paper itself

Abstract

It has been hypothesized that Alzheimer disease (AD) is primarily a disorder of the synapse. However, assessment of the synaptic proteome in AD subjects has been limited to a small number of proteins and often included subjects with end-stage pathology. Protein from prefrontal cortex gray matter of 59 AD subjects with mild to moderate dementia and 12 normal elderly subjects was assayed using targeted mass spectrometry to quantify 191 synaptically expressed proteins. The profile of synaptic protein expression clustered AD subjects into two groups. One of these was characterized by reduced expression of glutamate receptor proteins, significantly increased synaptic protein network coexpression, and associated withApolipoprotein E*4 (APOE*4) carrier status. The second group, by contrast, showed few differences from control subjects. A subset of AD subjects had altered prefrontal cortex synaptic proteostasis for glutamate receptors and their signaling partners. Efforts to therapeutically target glutamate receptors in AD may have outcomes dependent on APOE*4 genotype.

Indexed as

AgedAged, 80 and overAlzheimer DiseaseApolipoprotein E4Down-RegulationFemaleGlutamic AcidHumansMaleMass SpectrometryMiddle AgedPrefrontal CortexProteomicsReceptors, GlutamateSignal TransductionSynapsesApolipoprotein E4Glutamic AcidReceptors, Glutamate

Identifiers

PMID27103636
PMCPMC4937502
OpenAlexW2482435621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.