Evidence map›Paper›PMID 27102368›Full record

ArticleJournal of neurochemistry2016

Functional characterization of neurotransmitter activation and modulation in a nematode model ligand-gated ion channel.

Stephanie A Heusser, Özge Yoluk, Göran Klement, Erika A Riederer, Erik Lindahl, Rebecca J Howard

Open access · greenAbstract read
In one paragraph

Article in Journal of neurochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Structural basis for allosteric transitions of a multidomain pentameric ligand-gated ion channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Stephanie A HeusserDepartment of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Stockholm, Sweden.ORCID 0000-0003-3224-4547
Özge YolukSwedish e-Science Research Center, KTH Royal Institute of Technology, Stockholm, Sweden.ORCID 0000-0001-8354-0253
Göran KlementDepartment of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Stockholm, Sweden.ORCID 0000-0001-8816-3186
Erika A RiedererDepartment of Chemistry, Skidmore College, Saratoga Springs, NY, USA.ORCID 0000-0003-1011-6536
Erik LindahlDepartment of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Stockholm, Sweden.ORCID 0000-0002-2734-2794
Rebecca J HowardDepartment of Chemistry, Skidmore College, Saratoga Springs, NY, USA.ORCID 0000-0003-2049-3378
Stockholm University · SESkidmore College · USKTH Royal Institute of Technology · SE

Funding

Functional and Structural Basis for Alcohol Modulation of GLIC ChannelsF32AA019875 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI HOWARD, REBECCA J. · 2011 to 2011
$53k
NIAAA NIH HHS F32 AA019875
6 · The paper itself

Abstract

The superfamily of pentameric ligand-gated ion channels includes neurotransmitter receptors that mediate fast synaptic transmission in vertebrates, and are targets for drugs including alcohols, anesthetics, benzodiazepines, and anticonvulsants. However, the mechanisms of ion channel opening, gating, and modulation in these receptors leave many open questions, despite their pharmacological importance. Subtle conformational changes in both the extracellular and transmembrane domains are likely to influence channel opening, but have been difficult to characterize given the limited structural data available for human membrane proteins. Recent crystal structures of a modified Caenorhabditis elegans glutamate-gated chloride channel (GluCl) in multiple states offer an appealing model system for structure-function studies. However, the pharmacology of the crystallographic GluCl construct is not well established. To establish the functional relevance of this system, we used two-electrode voltage-clamp electrophysiology in Xenopus oocytes to characterize activation of crystallographic and native-like GluCl constructs by L-glutamate and ivermectin. We also tested modulation by ethanol and other anesthetic agents, and used site-directed mutagenesis to explore the role of a region of Loop F which was implicated in ligand gating by molecular dynamics simulations. Our findings indicate that the crystallographic construct functionally models concentration-dependent agonism and allosteric modulation of pharmacologically relevant receptors. Specific substitutions at residue Leu174 in loop F altered direct L-glutamate activation, consistent with computational evidence for this region's role in ligand binding. These insights demonstrate conservation of activation and modulation properties in this receptor family, and establish a framework for GluCl as a model system, including new possibilities for drug discovery. In this study, we elucidate the validity of a modified glutamate-gated chloride channel (GluClcryst ) as a structurally accessible model for GABAA receptors. In contrast to native-like controls, GluClcryst exhibits classical activation by its neurotransmitter ligand L-glutamate. The modified channel is also sensitive to allosteric modulators associated with human GABAA receptors, and to site-directed mutations predicted to alter channel opening.

Indexed as

AnimalsChloride ChannelsFemaleGlutamic AcidHumansIon Channel GatingLigand-Gated Ion ChannelsMutagenesis, Site-DirectedNeurotransmitter AgentsXenopusChloride Channelsglutamate-gated chloride channelsGlutamic AcidLigand-Gated Ion ChannelsNeurotransmitter Agentsanestheticcys-loop receptorGluClIon channelpLGIC

Identifiers

PMID27102368
PMCPMC4936957
OpenAlexW2340665765

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.