Evidence map›Paper›PMID 27102355›Full record

ArticleScientific reports2016

GTP-binding of ARL-3 is activated by ARL-13 as a GEF and stabilized by UNC-119.

Qing Zhang, Yan Li, Yuxia Zhang, Vicente E Torres, Peter C Harris, Kun Ling, Jinghua Hu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. ARL13B-Cerulean rescuesbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Unraveling the Genetic Links Between Polycystic Kidney Disease and Hypertension Through ARL13B.International journal of nephrology and renovascular disease · 2025
    Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. RABL2 promotes the outward transition zone passage of signaling proteins in cilia via ARL3.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Unraveling the intricate cargo-BBSome coupling mechanism at the ciliary tip.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Functional compartmentalization of photoreceptor neurons.Pflugers Archiv : European journal of physiology · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Qing ZhangDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Yan LiDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Yuxia ZhangDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Vicente E TorresDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Peter C HarrisDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Kun LingDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, USA.
Jinghua HuDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Mayo Clinic · US

Funding

Pilot and FeasibilityP30DK090728 · NIDDK · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2010 to 2019
$11.8M
Transgenic and Knockout Models of ADPKDR01DK059597 · NIDDK · MAYO CLINIC ROCHESTER · PI Peter C. Harris · 2002 to 2026
$9.5M
RENIN ANGIOTENSIN SYSTEM IN THE PATHOGENESIS OF ADPKDR01DK044863 · NIDDK · MAYO CLINIC ROCHESTER · PI TORRES, VICENTE E · 1991 to 2019
$4.5M
Exploration of the functions of the ciliopathy Arls in cilia.R01DK090038 · NIDDK · MAYO CLINIC ROCHESTER · PI HU, JINGHUA · 2011 to 2019
$3.1M
Phosphoinsitide signaling in Breast Epithelial Morphogenesis and MetastasisR01CA149039 · NCI · MAYO CLINIC ROCHESTER · PI LING, KUN · 2010 to 2014
$1.6M
NCI NIH HHS R01 CA149039NIDDK NIH HHS P30 DK090728NIDDK NIH HHS R01 DK044863NIDDK NIH HHS R01 DK059597NIDDK NIH HHS R01 DK090038
6 · The paper itself

Abstract

Primary cilia are sensory organelles indispensable for organogenesis and tissue pattern formation. Ciliopathy small GTPase ARLs are proposed as prominent ciliary switches, which when disrupted result in dysfunctional cilia, yet how ARLs are activated remain elusive. Here, we discover a novel small GTPase functional module, which contains ARL-3, ARL-13, and UNC-119, localizes near the poorly understood inversin (InV)-like compartment in C. elegans. ARL-13 acts synergistically with UNC-119, but antagonistically with ARL-3, in regulating ciliogenesis. We demonstrate that ARL-3 is a unique small GTPase with unusual high intrinsic GDP release but low intrinsic GTP binding rate. Importantly, ARL-13 acts as a nucleotide exchange factor (GEF) of ARL-3, while UNC-119 can stabilize the GTP binding of ARL-3. We further show that excess inactivated ARL-3 compromises ciliogenesis. The findings reveal a novel mechanism that one ciliopathy GTPase ARL-13, as a GEF, coordinates with UNC-119, which may act as a GTP-binding stabilizing factor, to properly activate another GTPase ARL-3 in cilia, a regulatory process indispensable for ciliogenesis.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCiliaGuanosine TriphosphateMonomeric GTP-Binding ProteinsNerve Tissue ProteinsOrganogenesisProtein BindingProtein Interaction MappingARL-13 protein, C elegansARL-3 protein, C elegansCaenorhabditis elegans ProteinsGuanosine TriphosphateMonomeric GTP-Binding ProteinsNerve Tissue ProteinsUNC-119 protein, C elegans

Identifiers

PMID27102355
PMCPMC4840320
OpenAlexW2340045810

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.