Evidence map›Paper›PMID 27102167›Full record

ArticleViruses2016

Discovery of Novel Alphacoronaviruses in European Rodents and Shrews.

Theocharis Tsoleridis, Okechukwu Onianwa, Emma Horncastle, Emma Dayman, Miaoran Zhu, Taechasit Danjittrong, Marta Wachtl, Jerzy M Behnke, Sarah Chapman, Victoria Strong and 4 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

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  14. Surveillance for SARS-CoV-2 in Norway Rats (Transboundary and emerging diseases · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Theocharis TsoleridisSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. stxtt6@exmail.nottingham.ac.uk.
Okechukwu OnianwaSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. nixoo@exmail.nottingham.ac.uk.
Emma HorncastleSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. stxerh@nottingham.ac.uk.
Emma DaymanSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. stxed3@nottingham.ac.uk.
Miaoran ZhuSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. msxmz@nottingham.ac.uk.
Taechasit DanjittrongSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. taechasit@live.com.
Marta WachtlSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. mzymw3@nottingham.ac.uk.
Jerzy M BehnkeSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. J.Behnke@nottingham.ac.uk.
Sarah ChapmanTwycross Zoo, Burton Road, Atherstone, Warwickshire CV9 3PX, UK. sarah.chapman@twycrosszoo.org.
Victoria StrongTwycross Zoo, Burton Road, Atherstone, Warwickshire CV9 3PX, UK. ntxvjs@exmail.nottingham.ac.uk.
Phillipa DobbsTwycross Zoo, Burton Road, Atherstone, Warwickshire CV9 3PX, UK. phillipa.dobbs@twycrosszoo.org.
Jonathan K BallSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. jonathan.ball@nottingham.ac.uk.
Rachael E TarlintonSchool of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK. rachael.tarlinton@nottingham.ac.uk.
C Patrick McClureSchool of Life Sciences, University of Nottingham, Nottingham NG7 2UH, UK. patrick.mcclure@nottingham.ac.uk.
University of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Eight hundred and thirteen European rodents and shrews encompassing seven different species were screened for alphacoronaviruses using PCR detection. Novel alphacoronaviruses were detected in the species Rattus norvegicus, Microtus agrestis, Sorex araneus and Myodes glareolus. These, together with the recently described Lucheng virus found in China, form a distinct rodent/shrew-specific clade within the coronavirus phylogeny. Across a highly conserved region of the viral polymerase gene, the new members of this clade were up to 22% dissimilar at the nucleotide level to the previously described Lucheng virus. As such they might represent distinct species of alphacoronaviruses. These data greatly extend our knowledge of wildlife reservoirs of alphacoronaviruses.

Indexed as

AnimalsCoronavirusCoronavirus InfectionsEuropeGenotypeMass ScreeningPhylogenyPolymerase Chain ReactionRodentiaSequence Analysis, DNAShrewsViral ProteinsViral Proteinsalphacoronaviruscoronavirusesrodentsshrews

Identifiers

PMID27102167
PMCPMC4810274
OpenAlexW2302398680

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.