Evidence map›Paper›PMID 27100889›Full record

ArticlePloS one2016

The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

Reinis Rutkis, Inese Strazdina, Elina Balodite, Zane Lasa, Nina Galinina, Uldis Kalnenieks

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

  1. Eminent Antimicrobial Peptide Resistance inAntibiotics (Basel, Switzerland) · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Cell Aggregation and Aerobic Respiration Are Important forApplied and environmental microbiology · 2019
    Article
  10. Improvement of Acetaldehyde Production inFrontiers in microbiology · 2019
    Article
  11. Review
  12. Genome Wide Phosphoproteome Analysis ofFrontiers in microbiology · 2019
    Article
  13. Aerobic catabolism and respiratory lactate bypass in Ndh-negativeMetabolic engineering communications · 2018
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Reinis RutkisInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
Inese StrazdinaInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
Elina BaloditeInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
Zane LasaInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
Nina GalininaInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
Uldis KalnenieksInstitute of Microbiology and Biotechnology, University of Latvia, Jelgavas Street 1, Riga, LV-1004, Latvia.
University of Latvia · LV

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc.), some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in other respiring bacteria and yeast. This effect takes place after air is introduced to glucose-consuming anaerobic cell suspension, and can be simulated using a kinetic model of the Entner-Doudoroff pathway in combination with a simple net reaction of NADH oxidation that does not involve oxidative phosphorylation. Although aeration hampers batch growth of respiring Z. mobilis culture due to accumulation of toxic byproducts, nevertheless under non-growing conditions respiration is shown to confer an adaptive advantage for the wild type over the non-respiring Ndh knock-out mutant. If cells get occasional access to limited amount of glucose for short periods of time, the elevated glucose uptake rate selectively improves survival of the respiring Z. mobilis phenotype.

Indexed as

Electron TransportFermentationAerobiosisGlucoseKineticsNADOxidation-ReductionOxidative PhosphorylationZymomonasGlucoseNAD

Identifiers

PMID27100889
PMCPMC4839697
OpenAlexW2339918896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.