Evidence map›Paper›PMID 27098078›Full record

ArticleBirth defects research. Part A, Clinical and molecular teratology2016

Joint effects of genetic variants and residential proximity to pesticide applications on hypospadias risk.

Suzan L Carmichael, Wei Yang, Chen Ma, Eric Roberts, Susan Kegley, Paul English, Edward J Lammer, John S Witte, Gary M Shaw

Abstract read
In one paragraph

Article in Birth defects research. Part A, Clinical and molecular teratology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

  1. The Alberta Congenital Anomalies Surveillance System: a 40-year review with prevalence and trends for selected congenital anomalies, 1997-2019.Health promotion and chronic disease prevention in Canada : research, policy and practice · 2023
    Article
  2. Pesticide Exposure in Relation to the Incidence of Abnormal Glucose Regulation: A Retrospective Cohort Study.International journal of environmental research and public health · 2022
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Suzan L CarmichaelDepartment of Pediatrics, Division of Neonatology and Developmental Medicine, Stanford University School of Medicine, Stanford, California.
Wei YangDepartment of Pediatrics, Division of Neonatology and Developmental Medicine, Stanford University School of Medicine, Stanford, California.
Chen MaDepartment of Pediatrics, Division of Neonatology and Developmental Medicine, Stanford University School of Medicine, Stanford, California.
Eric RobertsPublic Health Institute, Oakland, California.
Susan KegleyPesticide Research Institute, Berkeley, California.
Paul EnglishCalifornia Department of Public Health, Richmond, California.
Edward J LammerUCSF Benioff Children's Hospital Oakland, Oakland, California.
John S WitteDepartment of Epidemiology and Biostatistics and Institute of Human Genetics, University of California, San Francisco, California.
Gary M ShawDepartment of Pediatrics, Division of Neonatology and Developmental Medicine, Stanford University School of Medicine, Stanford, California.
Stanford University · USCalifornia Department of Pesticide Regulation · USCalifornia Department of Public Health · USPublic Health Institute · USUCSF Benioff Children's Hospital · USUniversity of California, San Francisco · US

Funding

California Center of BD-STEPS - Finding Causes and Preventives of Birth DefectsU01DD001033 · DD · STANFORD UNIVERSITY · PI CARMICHAEL, SUZAN L, SHAW, GARY M · 2013 to 2017
$3.4M
Genes, environmental exposures, and hypospadiasR01ES017060 · NIEHS · STANFORD UNIVERSITY · PI CARMICHAEL, SUZAN L · 2008 to 2012
$1.7M
Exogenous Stressors and Birth Defects RisksR01HD042538 · NICHD · MARCH OF DIMES BIRTH DEFECTS FOUNDATION · PI CARMICHAEL, SUZAN L · 2003 to 2005
$626k
NCBDD CDC HHS U01 DD001033NICHD NIH HHS R01 HD042538NIEHS NIH HHS R01 ES017060
6 · The paper itself

Abstract

backgroundWe examined risks associated with joint exposure of gene variants and pesticides.

methodsAnalyses included 189 cases and 390 male controls born from 1991 to 2003 in California's San Joaquin Valley. We used logistic regression to examine risks associated with joint exposures of gene variants and pesticides that our previous work identified as associated with hypospadias. Genetic variables were based on variants in DGKK, genes involved in sex steroid synthesis/metabolism, and genes involved in genital tubercle development. Pesticide exposure was based on residential proximity to commercial agricultural pesticide applications.

resultsOdds ratios (ORs) were highest among babies with joint exposures, who had two- to fourfold increased risks; for example, the OR was 3.7 (95% confidence interval [CI], 0.8-16.5) among subjects with the risk-associated DGKK haplotype and pesticide exposure; OR, 1.5 (95% CI, 0.7-3.1) among subjects with the haplotype and no pesticide exposure; and OR, 0.9 (95% CI, 0.5-1.6) among subjects without the haplotype but with pesticide exposure, relative to subjects with neither. However, results did not provide statistical evidence that these risks were significantly greater than expected on an additive scale, relative to risks associated with one exposure at a time.

conclusionWe observed elevated risks associated with joint exposures to selected pesticides and genetic variants but no statistical evidence for interaction. Birth Defects Research (Part A) 106:653-658, 2016. © 2016 Wiley Periodicals, Inc.

Indexed as

Gene-Environment InteractionPolymorphism, GeneticAdultCaliforniaCase-Control StudiesDiacylglycerol KinaseEnvironmental ExposureFemaleGene ExpressionHaplotypesHumansHypospadiasInfant, NewbornLogistic ModelsMaleMaternal ExposureDiacylglycerol KinasePesticidesbirth defectsgeneshypospadiaspesticidesurogenital

Identifiers

PMID27098078
PMCPMC4983249
OpenAlexW2467140152

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.