Evidence map›Paper›PMID 27097561›Full record

ArticleNature communications2016

Ancient horizontal transfers of retrotransposons between birds and ancestors of human pathogenic nematodes.

Alexander Suh, Christopher C Witt, Juliana Menger, Keren R Sadanandan, Lars Podsiadlowski, Michael Gerth, Anne Weigert, Jimmy A McGuire, Joann Mudge, Scott V Edwards and 1 more

Open access · goldAbstract readHistorical Article
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
26.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 114 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 9 institutions in 4 countries.

Alexander SuhDepartment of Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, SE-752 36 Uppsala, Sweden.
Christopher C WittDepartment of Biology and Museum of Southwestern Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA.
Juliana MengerDepartment of Conservation Biology, Helmholtz Centre for Environmental Research (UFZ), D-04318 Leipzig, Germany.
Keren R SadanandanDepartment of Biological Sciences, National University of Singapore, Singapore 117543, Singapore.
Lars PodsiadlowskiInstitute of Evolutionary Biology and Ecology, University of Bonn, D-53121 Bonn, Germany.
Michael GerthMolecular Evolution and Systematics of Animals, Institute of Biology, University of Leipzig, D-04103 Leipzig, Germany.
Anne WeigertMolecular Evolution and Systematics of Animals, Institute of Biology, University of Leipzig, D-04103 Leipzig, Germany.
Jimmy A McGuireMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, Berkeley, California 94720, USA.
Joann MudgeNational Center for Genome Resources, Santa Fe, New Mexico 87505, USA.
Scott V EdwardsDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, USA.
Frank E RheindtDepartment of Biological Sciences, National University of Singapore, Singapore 117543, Singapore.
Leipzig University · DENational University of Singapore · SGHarvard University · USHelmholtz Centre for Environmental Research · DENational Center for Genome Resources · USUniversity of Bonn · DEUniversity of California, Berkeley · USUniversity of New Mexico · USUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parasite host switches may trigger disease emergence, but prehistoric host ranges are often unknowable. Lymphatic filariasis and loiasis are major human diseases caused by the insect-borne filarial nematodes Brugia, Wuchereria and Loa. Here we show that the genomes of these nematodes and seven tropical bird lineages exclusively share a novel retrotransposon, AviRTE, resulting from horizontal transfer (HT). AviRTE subfamilies exhibit 83-99% nucleotide identity between genomes, and their phylogenetic distribution, paleobiogeography and invasion times suggest that HTs involved filarial nematodes. The HTs between bird and nematode genomes took place in two pantropical waves, >25-22 million years ago (Myr ago) involving the Brugia/Wuchereria lineage and >20-17 Myr ago involving the Loa lineage. Contrary to the expectation from the mammal-dominated host range of filarial nematodes, we hypothesize that these major human pathogens may have independently evolved from bird endoparasites that formerly infected the global breadth of avian biodiversity.

Indexed as

Gene Transfer, HorizontalAnimalsBiological EvolutionBird DiseasesBirdsBrugiaElephantiasis, FilarialFilariasisHistory, AncientHumansLoaLoiasisPhylogenyPhylogeographyRetroelementsWuchereriaRetroelements

Identifiers

PMID27097561
PMCPMC4844689
OpenAlexW2336274701

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.