Evidence map›Paper›PMID 27095568›Full record

ArticleParasitology research2016

Genetic variation of mini- and microsatellites and a clonal structure in Enterocytozoon bieneusi population in foxes and raccoon dogs and population differentiation of the parasite between fur animals and humans.

Wei Li, Qiang Wan, Qinlei Yu, Yuqi Yang, Wei Tao, Yanxue Jiang, Lihua Xiao

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In one paragraph

Article in Parasitology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Ecological and public health significance ofOne health (Amsterdam, Netherlands) · 2021
    Review
  3. Zoonotic parasites in farmed exotic animals in China: Implications to public health.International journal for parasitology. Parasites and wildlife · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Multilocus Sequence Typing ofFrontiers in microbiology · 2020
    Article
  8. Article
  9. Article
  10. Prevalence and Population Genetics Analysis ofFrontiers in microbiology · 2019
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Wei LiCollege of Veterinary Medicine, Northeast Agricultural University, 59 Mucai street, Harbin, Heilongjiang, 150030, China. neaulw@gmail.com.
Qiang WanCollege of Veterinary Medicine, Northeast Agricultural University, 59 Mucai street, Harbin, Heilongjiang, 150030, China.
Qinlei YuJilin Provincial Animal Disease Control Center, 4510 Xi'an Road, Changchun, Jilin, 130062, China.
Yuqi YangCollege of Veterinary Medicine, Northeast Agricultural University, 59 Mucai street, Harbin, Heilongjiang, 150030, China.
Wei TaoCollege of Veterinary Medicine, Northeast Agricultural University, 59 Mucai street, Harbin, Heilongjiang, 150030, China.
Yanxue JiangCollege of Veterinary Medicine, Northeast Agricultural University, 59 Mucai street, Harbin, Heilongjiang, 150030, China.
Lihua XiaoDivision of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, 1600 Clifton Rd NE, Atlanta, GA, 30333, USA. lax0@cdc.gov.
Northeast Agricultural University · CNCenters for Disease Control and Prevention · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enterocytozoon bieneusi is an obligate intracellular protozoan parasite that infects a wide range of mammal hosts and birds. Previous genotypic surveys were limited to measure the polymorphisms at the ribosomal internal transcribed spacer (ITS) that evolved slowly. Data on population structure are available only on E. bieneusi isolates from primates. This study explored the genotypic and phylogenetic characteristics of four mini- and microsatellites and performed a population genetic analysis in 39 E. bieneusi isolates of potentially zoonotic ITS genotype D from farmed foxes and raccoon dogs in China. Sequence polymorphisms facilitated determination of six, two, four, and five genotypes at markers MS1, MS3, MS4, and MS7, respectively. Patterns of phylogeny revealed different levels of diversity within and among the genetic markers. Clear genotypic and phylogenetic divergences between E. bieneusi isolates of ITS genotype D from fur animals and humans were observed at individual markers. Complete linkage disequilibrium and very limited recombination in subsequent population genetic analysis supported a clonal structure for E. bieneusi population from fur animals (FID). Phylogenetic analysis, genetic network, and measures of F ST and gene flow demonstrated population differentiation of FID from two known human E. bieneusi populations HID (with a clonal structure) and HIA (with an epidemic structure). The data indicated an ideal resolving power of MLST compared to the previously widely used ITS genotyping and confirmed the clonal nature and population differentiation of E. bieneusi in various hosts.

Indexed as

Genetics, PopulationAnimalsChinaEnterocytozoonFecesFoxesGene Regulatory NetworksGenetic VariationGenotypeHumansLinkage DisequilibriumMicrosatellite RepeatsMicrosporidiosisMultilocus Sequence TypingMycological Typing TechniquesPhylogenyEnterocytozoon bieneusiGenetic diversityLinkage disequilibriumMultilocus sequence typingPopulation geneticsPopulation structure

Identifiers

PMID27095568
OpenAlexW2341883359

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.