Evidence map›Paper›PMID 27095192›Full record

ArticleNucleic acids research2016

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.

Ivica Letunic, Peer Bork

Abstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2,854 papers.

0numbers the graph read from it
0cells of the map it votes in
2,854citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2,854 citing papers in PubMed.

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  10. Multifaceted and evolutionarily dynamic interactions betweenbioRxiv : the preprint server for biology · 2026
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  13. Taxonomic Revision ofJournal of fungi (Basel, Switzerland) · 2026
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  18. Programmed DNA elimination was present in the last common ancestor ofbioRxiv : the preprint server for biology · 2026
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  20. Article

2,794 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ivica LetunicBiobyte solutions GmbH, Bothestr 142, 69126 Heidelberg, Germany letunic@biobyte.de.ORCID 0000-0003-3560-4288
Peer BorkEuropean Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany Max Delbrück Centre for Molecular Medicine, 13125 Berlin, Germany Department of Bioinformatics, Biocenter, University of Würzburg, 97074 Würzburg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactive Tree Of Life (http://itol.embl.de) is a web-based tool for the display, manipulation and annotation of phylogenetic trees. It is freely available and open to everyone. The current version was completely redesigned and rewritten, utilizing current web technologies for speedy and streamlined processing. Numerous new features were introduced and several new data types are now supported. Trees with up to 100,000 leaves can now be efficiently displayed. Full interactive control over precise positioning of various annotation features and an unlimited number of datasets allow the easy creation of complex tree visualizations. iTOL 3 is the first tool which supports direct visualization of the recently proposed phylogenetic placements format. Finally, iTOL's account system has been redesigned to simplify the management of trees in user-defined workspaces and projects, as it is heavily used and currently handles already more than 500,000 trees from more than 10,000 individual users.

Indexed as

Biological EvolutionPhylogenyUser-Computer InterfaceAlgorithmsAnimalsArchaeaBacteriaComputer GraphicsDatasets as TopicEukaryotaHumansInformation Storage and RetrievalInternet

Identifiers

PMID27095192
PMCPMC4987883

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.