Evidence map›Paper›PMID 27095025›Full record

ArticleRNA (New York, N.Y.)2016

CFIm25 regulates glutaminase alternative terminal exon definition to modulate miR-23 function.

Chioniso P Masamha, Zheng Xia, Natoya Peart, Scott Collum, Wei Li, Eric J Wagner, Ann-Bin Shyu

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Reduced Usage ofPhenomics (Cham, Switzerland) · 2025
    Article
  5. Article
  6. Review
  7. Characterization and molecular targeting of CFIm25 (NUDT21/CPSF5) mRNA using miRNAs.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  8. Article
  9. HuR controls glutaminase RNA metabolism.Nature communications · 2024
    Article
  10. Article
  11. Article
  12. Impacts and mechanisms of alternative mRNA splicing in cancer metabolism, immune response, and therapeutics.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. A glutaminase isoform switch drives therapeutic resistance and disease progression of prostate cancer.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Review
  18. The role of alternative splicing in human cancer progression.American journal of cancer research · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chioniso P MasamhaDepartment of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas 77030, USA.
Zheng XiaDivision of Biostatistics, Dan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Natoya PeartDepartment of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas 77030, USA The University of Texas Graduate School of Biomedical Sciences at Houston, Houston, Texas 77030, USA.
Scott CollumDepartment of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas 77030, USA The University of Texas Graduate School of Biomedical Sciences at Houston, Houston, Texas 77030, USA.
Wei LiDivision of Biostatistics, Dan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.
Eric J WagnerDepartment of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas 77030, USA The University of Texas Graduate School of Biomedical Sciences at Houston, Houston, Texas 77030, USA.
Ann-Bin ShyuDepartment of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas 77030, USA The University of Texas Graduate School of Biomedical Sciences at Houston, Houston, Texas 77030, USA.
The University of Texas Health Science Center · USBaylor College of Medicine · US

Funding

Messenger RNA Turnover in Mammalian CellsR01GM046454 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SHYU, ANN-BIN · 1991 to 2016
$7.1M
Computational and Experimental Modeling of Alternative PolyadenylationR01CA193466 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LI, WEI · 2016 to 2025
$3.3M
Computational and Experimental Modeling of Epigenetic DNA MethylationR01HG007538 · NHGRI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LI, WEI · 2014 to 2018
$1.9M
A HTS Assay for Inhibitors of Proximal Cleavage and PolyadenylationR01CA166274 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI WAGNER, ERIC J · 2012 to 2014
$821k
Alternative Cleavage and Polyadenylation Events as BiomarkersR03CA167752 · NCI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI WAGNER, ERIC J · 2013 to 2014
$150k
NCI NIH HHS R01 CA166274NCI NIH HHS R01 CA193466NCI NIH HHS R03 CA167752NHGRI NIH HHS R01 HG007538NIGMS NIH HHS R01 GM046454
6 · The paper itself

Abstract

Alternative polyadenylation (APA) and alternative splicing (AS) provide mRNAs with the means to avoid microRNA repression through selective shortening or differential usage of 3'UTRs. The two glutaminase (GLS) mRNA isoforms, termed KGA and GAC, contain distinct 3'UTRs with the KGA isoform subject to repression by miR-23. We show that depletion of the APA regulator CFIm25 causes a strong shift to the usage of a proximal poly(A) site within the KGA 3'UTR and also alters splicing to favor exclusion of the GAC 3'UTR. Surprisingly, we observe that while miR-23 is capable of down-regulating the shortened KGA 3'UTR, it has only minor impact on the full-length KGA 3'UTR, demonstrating that additional potent negative regulation of GLS expression exists beyond this single microRNA targeting site. Finally, we show that the apoptosis induced upon down-regulation of the GAC isoform can be alleviated through concurrent reduction in CFIm25 expression, revealing the sensitivity of glutaminase expression to the levels of RNA processing factors. These results exemplify the complex interplay between RNA processing and microRNA repression in controlling glutamine metabolism in cancer cells.

Indexed as

Alternative SplicingExons3' Untranslated RegionsGlutaminaseHEK293 CellsHeLa CellsHumansIsoenzymesMicroRNAsPoly APolyadenylation3' Untranslated RegionsGlutaminaseIsoenzymesMicroRNAsMIRN23a microRNA, humanPoly Aalternative polyadenylationcell growthc-Mycglutaminaseglutamine addictionmiRNA

Identifiers

PMID27095025
PMCPMC4878610
OpenAlexW2341022504

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.