Evidence map›Paper›PMID 27093436›Full record

ArticlePloS one2016

Unfolded Protein Response (UPR) Regulator Cib1 Controls Expression of Genes Encoding Secreted Virulence Factors in Ustilago maydis.

Martin Hampel, Mareike Jakobi, Lara Schmitz, Ute Meyer, Florian Finkernagel, Gunther Doehlemann, Kai Heimel

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  9. The Biotrophic Development ofThe Plant cell · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Martin HampelDepartment of Molecular Microbiology and Genetics, Institute for Microbiology and Genetics, Göttingen, Germany.
Mareike JakobiDepartment of Molecular Microbiology and Genetics, Institute for Microbiology and Genetics, Göttingen, Germany.
Lara SchmitzDepartment of Molecular Microbiology and Genetics, Institute for Microbiology and Genetics, Göttingen, Germany.
Ute MeyerBotanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne Germany.
Florian FinkernagelInstitute of Molecular Biology and Tumor Research (IMT), Philipps-University, Marburg, Germany.
Gunther DoehlemannBotanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne Germany.
Kai HeimelDepartment of Molecular Microbiology and Genetics, Institute for Microbiology and Genetics, Göttingen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The unfolded protein response (UPR), a conserved eukaryotic signaling pathway to ensure protein homeostasis in the endoplasmic reticulum (ER), coordinates biotrophic development in the corn smut fungus Ustilago maydis. Exact timing of UPR activation is required for virulence and presumably connected to the elevated expression of secreted effector proteins during infection of the host plant Zea mays. In the baker's yeast Saccharomyces cerevisiae, expression of UPR target genes is induced upon binding of the central regulator Hac1 to unfolded protein response elements (UPREs) in their promoters. While a role of the UPR in effector secretion has been described previously, we investigated a potential UPR-dependent regulation of genes encoding secreted effector proteins. In silico prediction of UPREs in promoter regions identified the previously characterized effector genes pit2 and tin1-1, as bona fide UPR target genes. Furthermore, direct binding of the Hac1-homolog Cib1 to the UPRE containing promoter fragments of both genes was confirmed by quantitative chromatin immunoprecipitation (qChIP) analysis. Targeted deletion of the UPRE abolished Cib1-dependent expression of pit2 and significantly affected virulence. Furthermore, ER stress strongly increased Pit2 expression and secretion. This study expands the role of the UPR as a signal hub in fungal virulence and illustrates, how biotrophic fungi can coordinate cellular physiology, development and regulation of secreted virulence factors.

Indexed as

Endoplasmic ReticulumEndoplasmic Reticulum StressGene Expression Regulation, FungalPromoter Regions, GeneticProtein FoldingRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTranscription FactorsUnfolded Protein ResponseUstilagoVirulenceVirulence FactorsZea maysRepressor ProteinsSaccharomyces cerevisiae ProteinsTranscription FactorsVirulence Factors

Identifiers

PMID27093436
PMCPMC4836707

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.