Evidence map›Paper›PMID 27093168›Full record

ArticleMolecular therapy. Nucleic acids2016

pEVL: A Linear Plasmid for Generating mRNA IVT Templates With Extended Encoded Poly(A) Sequences.

Alexandra E Grier, Stephen Burleigh, Jaya Sahni, Courtnee A Clough, Victoire Cardot, Dongwook C Choe, Michelle C Krutein, David J Rawlings, Michael C Jensen, Andrew M Scharenberg and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 84 citations in OpenAlex.

  1. EvaluatingRNA biology · 2026
    Article
  2. Towards mRNA therapeutics 2.0.Nature reviews. Drug discovery · 2026
    Review
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  20. RNA-Based Vaccines and Therapeutics Against Intracellular Pathogens.Methods in molecular biology (Clifton, N.J.) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Alexandra E GrierCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Stephen BurleighCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Jaya SahniCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Courtnee A CloughCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Victoire CardotCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Dongwook C ChoeCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Michelle C KruteinPathology Department, University of Washington School of Medicine, Seattle, Washington, USA.
David J RawlingsCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Michael C JensenBen Towne Center for Childhood Cancer Research, Seattle Children's Research Institute, Seattle, Washington, USA.
Andrew M ScharenbergCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Kyle JacobyCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, Washington, USA.
Seattle Children's Hospital · USUniversity of Washington · USFred Hutch Cancer Center · US

Funding

University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
ZFN-Modified Stem Cells for HIV EradicationU19AI096111 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI JEROME, KEITH R · 2011 to 2015
$20.8M
NIAID NIH HHS U19 AI096111NIGMS NIH HHS T32 GM007266
6 · The paper itself

Abstract

Increasing demand for large-scale synthesis of in vitro transcribed (IVT) mRNA is being driven by the increasing use of mRNA for transient gene expression in cell engineering and therapeutic applications. An important determinant of IVT mRNA potency is the 3' polyadenosine (poly(A)) tail, the length of which correlates with translational efficiency. However, present methods for generation of IVT mRNA rely on templates derived from circular plasmids or PCR products, in which homopolymeric tracts are unstable, thus limiting encoded poly(A) tail lengths to ~120 base pairs (bp). Here, we have developed a novel method for generation of extended poly(A) tracts using a previously described linear plasmid system, pJazz. We find that linear plasmids can successfully propagate poly(A) tracts up to ~500 bp in length for IVT mRNA production. We then modified pJazz by removing extraneous restriction sites, adding a T7 promoter sequence upstream from an extended multiple cloning site, and adding a unique type-IIS restriction site downstream from the encoded poly(A) tract to facilitate generation of IVT mRNA with precisely defined encoded poly(A) tracts and 3' termini. The resulting plasmid, designated pEVL, can be used to generate IVT mRNA with consistent defined lengths and terminal residue(s).

Identifiers

PMID27093168
PMCPMC5014522
OpenAlexW2339574870

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.