Evidence map›Paper›PMID 27092780›Full record

ArticlePLoS computational biology2016

APP Is a Context-Sensitive Regulator of the Hippocampal Presynaptic Active Zone.

Melanie Laßek, Jens Weingarten, Martin Wegner, Benjamin F Mueller, Marion Rohmer, Dominic Baeumlisberger, Tabiwang N Arrey, Meike Hick, Jörg Ackermann, Amparo Acker-Palmer and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. The Amyloid Precursor Protein Regulates Synaptic Transmission at Medial Perforant Path Synapses.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  3. Article
  4. Article
  5. Amyloid, APP, and Electrical Activity of the Brain.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2020
    Review
  6. Article
  7. Review
  8. Review
  9. Human Brain-Derived Aβ Oligomers Bind to Synapses and Disrupt Synaptic Activity in a Manner That Requires APP.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  10. Review
  11. HumanNeural plasticity · 2017
    Article
  12. Article
  13. APP-A Novel Player within the Presynaptic Active Zone Proteome.Frontiers in molecular neuroscience · 2017
    Review
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Melanie LaßekInstitute for Cell Biology and Neuroscience, Biologicum, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Jens WeingartenInstitute for Cell Biology and Neuroscience, Biologicum, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Martin WegnerInstitute for Molecular Bioinformatics, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Benjamin F MuellerInstitute of Pharmaceutical Chemistry, Cluster of Excellence "Macromolecular Complexes", Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Marion RohmerInstitute of Pharmaceutical Chemistry, Cluster of Excellence "Macromolecular Complexes", Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Dominic BaeumlisbergerSunChrom Wissenschaftliche Geräte GmbH, Friedrichsdorf, Germany.
Tabiwang N ArreyThermo Fisher Scientific, Bremen, Germany.
Meike HickDepartment of Pharmacy and Molecular Biotechnology, University Heidelberg, Heidelberg Germany.
Jörg AckermannInstitute for Molecular Bioinformatics, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Amparo Acker-PalmerInstitute for Cell Biology and Neuroscience, Biologicum, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Ina KochInstitute for Molecular Bioinformatics, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Ulrike MüllerDepartment of Pharmacy and Molecular Biotechnology, University Heidelberg, Heidelberg Germany.
Michael KarasInstitute of Pharmaceutical Chemistry, Cluster of Excellence "Macromolecular Complexes", Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Walter VolknandtInstitute for Cell Biology and Neuroscience, Biologicum, Johann Wolfgang Goethe-University, Frankfurt am Main, Germany.
Goethe University Frankfurt · DEHeidelberg University · DEThermo Fisher Scientific (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hallmarks of Alzheimer's disease (AD) are characterized by cognitive decline and behavioral changes. The most prominent brain region affected by the progression of AD is the hippocampal formation. The pathogenesis involves a successive loss of hippocampal neurons accompanied by a decline in learning and memory consolidation mainly attributed to an accumulation of senile plaques. The amyloid precursor protein (APP) has been identified as precursor of Aβ-peptides, the main constituents of senile plaques. Until now, little is known about the physiological function of APP within the central nervous system. The allocation of APP to the proteome of the highly dynamic presynaptic active zone (PAZ) highlights APP as a yet unknown player in neuronal communication and signaling. In this study, we analyze the impact of APP deletion on the hippocampal PAZ proteome. The native hippocampal PAZ derived from APP mouse mutants (APP-KOs and NexCreAPP/APLP2-cDKOs) was isolated by subcellular fractionation and immunopurification. Subsequently, an isobaric labeling was performed using TMT6 for protein identification and quantification by high-resolution mass spectrometry. We combine bioinformatics tools and biochemical approaches to address the proteomics dataset and to understand the role of individual proteins. The impact of APP deletion on the hippocampal PAZ proteome was visualized by creating protein-protein interaction (PPI) networks that incorporated APP into the synaptic vesicle cycle, cytoskeletal organization, and calcium-homeostasis. The combination of subcellular fractionation, immunopurification, proteomic analysis, and bioinformatics allowed us to identify APP as structural and functional regulator in a context-sensitive manner within the hippocampal active zone network.

Indexed as

Alzheimer DiseaseAmyloid beta-Protein PrecursorAnimalsComputational BiologyHippocampusHumansMiceMice, Inbred C57BLMice, KnockoutPresynaptic TerminalsProtein Interaction MapsProteomeSynapsesAmyloid beta-Protein PrecursorAplp2 protein, mouseProteome

Identifiers

PMID27092780
PMCPMC4836664
OpenAlexW2338870414

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.