Evidence map›Paper›PMID 27092129›Full record

ArticleFrontiers in microbiology2016

Factors Altering Pyruvate Excretion in a Glycogen Storage Mutant of the Cyanobacterium, Synechococcus PCC7942.

Phoebe J Benson, Diane Purcell-Meyerink, Charles H Hocart, Thy T Truong, Gabriel O James, Loraine Rourke, Michael A Djordjevic, Susan I Blackburn, G D Price

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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  11. Characterization of Light-Enhanced Respiration in Cyanobacteria.International journal of molecular sciences · 2020
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  12. Review
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  15. PHB is Produced from Glycogen Turn-over during Nitrogen Starvation inInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Phoebe J BensonResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Diane Purcell-MeyerinkResearch School of Biology, Plant Sciences, Australian National University, CanberraACT, Australia; North Australia Marine Research Alliance, Arafura Timor Research Facility, DarwinNT, Australia.
Charles H HocartResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Thy T TruongResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Gabriel O JamesResearch School of Biology, Plant Sciences, Australian National University, CanberraACT, Australia; Heliase Genomics, University of AucklandAuckland, New Zealand.
Loraine RourkeResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Michael A DjordjevicResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Susan I BlackburnCSIRO National Research Collections Australia, Hobart TAS, Australia.
G D PriceResearch School of Biology, Plant Sciences, Australian National University, Canberra ACT, Australia.
Australian National University · AUCommonwealth Scientific and Industrial Research Organisation · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interest in the production of carbon commodities from photosynthetically fixed CO2 has focused attention on cyanobacteria as a target for metabolic engineering and pathway investigation. We investigated the redirection of carbon flux in the model cyanobacterial species, Synechococcus elongatus PCC 7942, under nitrogen deprivation, for optimized production of the industrially desirable compound, pyruvate. Under nitrogen limited conditions, excess carbon is naturally stored as the multi-branched polysaccharide, glycogen, but a block in glycogen synthesis, via knockout mutation in the gene encoding ADP-glucose pyrophosphorylase (glgC), results in the accumulation of the organic acids, pyruvate and 2-oxoglutarate, as overflow excretions into the extracellular media. The ΔglgC strain, under 48 h of N-deprivation was shown to excrete pyruvate for the first time in this strain. Additionally, by increasing culture pH, to pH 10, it was possible to substantially elevate excretion of pyruvate, suggesting the involvement of an unknown substrate/proton symporter for export. The ΔglgC mutant was also engineered to express foreign transporters for glucose and sucrose, and then grown photomixotrophically with exogenous organic carbon supply, as added 5 mM glucose or sucrose during N- deprivation. Under these conditions we observed a fourfold increase in extracellular pyruvate excretion when glucose was added, and a smaller increase with added sucrose. Although the magnitude of pyruvate excretion did not correlate with the capacity of the ΔglgC strain for bicarbonate-dependent photosynthetic O2 evolution, or with light intensity, there was, however, a positive correlation observed between the density of the starter culture prior to N-deprivation and the final extracellular pyruvate concentration. The factors that contribute to enhancement of pyruvate excretion are discussed, as well as consideration of whether the source of carbon for pyruvate excretion might be derived from photosynthetic CO2 fixation or from remobilisation of existing carbon stores.

Indexed as

biotechnology of microorganismscyanobacterianitrogen deprivationoverflow metabolismphotosynthesisphysiolology and metabolismpyruvate excretion

Identifiers

PMID27092129
PMCPMC4820439
OpenAlexW2345891133

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.