Evidence map›Paper›PMID 27091448›Full record

ArticleThe Journal of cell biology2016

Spindle-E cycling between nuage and cytoplasm is controlled by Qin and PIWI proteins.

Arlise Andress, Yanxia Bei, Bryan R Fonslow, Ritika Giri, Yilong Wu, John R Yates, Richard W Carthew

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. How germ granules promote germ cell fate.Nature reviews. Genetics · 2024
    Review
  6. Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Arlise AndressDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208.
Yanxia BeiDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208.
Bryan R FonslowDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037.
Ritika GiriDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208.
Yilong WuDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037.
Richard W CarthewDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208 r-carthew@northwestern.edu.
Northwestern University · USScripps Research Institute · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Non-coding RNAs and their mechanisms and functions-RenewalR35GM118144 · NIGMS · NORTHWESTERN UNIVERSITY · PI Richard W. CARTHEW · 2016 to 2026
$6.8M
Molecular Mechanisms of Gene Silencing by RNAiR01GM068743 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 2003 to 2014
$4.1M
MicroRNA Regulation of Biological MechanismsR01GM077581 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 2006 to 2015
$2.9M
NCI NIH HHS P30 CA060553NIGMS NIH HHS R01 GM068743NIGMS NIH HHS R01 GM077581NIGMS NIH HHS R35 GM118144NIGMS NIH HHS T32 GM008061
6 · The paper itself

Abstract

Transposable elements (TEs) are silenced in germ cells by a mechanism in which PIWI proteins generate and use PIWI-interacting ribonucleic acid (piRNA) to repress expression of TE genes. piRNA biogenesis occurs by an amplification cycle in microscopic organelles called nuage granules, which are localized to the outer face of the nuclear envelope. One cofactor required for amplification is the helicase Spindle-E (Spn-E). We found that the Spn-E protein physically associates with the Tudor domain protein Qin and the PIWI proteins Aubergine (Aub) and Argonaute3 (Ago3). Spn-E and Qin proteins are mutually dependent for their exit from nuage granules, whereas Spn-E and both Aub and Ago3 are mutually dependent for their entry or retention in nuage. The result is a dynamic cycling of Spn-E and its associated factors in and out of nuage granules. This implies that nuage granules can be considered to be hubs for active, mobile, and transient complexes. We suggest that this is in some way coupled with the execution of the piRNA amplification cycle.

Indexed as

Adenosine TriphosphatasesAnimalsArgonaute ProteinsBiological TransportDNA Transposable ElementsDrosophilaDrosophila ProteinsModels, BiologicalNonlinear DynamicsPeptide Initiation FactorsRegression AnalysisRNA, Small InterferingUbiquitin-Protein LigasesAdenosine TriphosphatasesAGO3 protein, DrosophilaArgonaute Proteinsaub protein, DrosophilaDNA Transposable ElementsDrosophila ProteinsPeptide Initiation FactorsQin protein, DrosophilaRNA, Small Interferingspn-E protein, DrosophilaUbiquitin-Protein Ligases

Identifiers

PMID27091448
PMCPMC5084268
OpenAlexW2339093432

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.