Evidence map›Paper›PMID 27090374›Full record

ArticleJournal of neuroinflammation2016

Multiallelic copy number variation in the complement component 4A (C4A) gene is associated with late-stage age-related macular degeneration (AMD).

Felix Grassmann, Stuart Cantsilieris, Anja-Sabrina Schulz-Kuhnt, Stefan J White, Andrea J Richardson, Alex W Hewitt, Brendan J Vote, Denise Schmied, Robyn H Guymer, Bernhard H F Weber and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of neuroinflammation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 28 citations in OpenAlex.

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  10. The complement system in age-related macular degeneration.Cellular and molecular life sciences : CMLS · 2021
    Review
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  12. Age-Related Macular Degeneration: Epidemiology and Clinical Aspects.Advances in experimental medicine and biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Felix GrassmannInstitute of Human Genetics, University of Regensburg, Regensburg, 93053, Germany.
Stuart CantsilierisCentre for Eye Research, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Australia.
Anja-Sabrina Schulz-KuhntInstitute of Human Genetics, University of Regensburg, Regensburg, 93053, Germany.
Stefan J WhiteLeiden University Medical Center, Leiden, The Netherlands.
Andrea J RichardsonCentre for Eye Research, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Australia.
Alex W HewittCentre for Eye Research, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Australia.
Brendan J VoteSchool of Medicine, Menzies Research Institute Tasmania, University of Tasmania, Hobart, Tasmania, Australia.
Denise SchmiedInstitute of Human Genetics, University of Regensburg, Regensburg, 93053, Germany.
Robyn H GuymerCentre for Eye Research, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Australia.
Bernhard H F WeberInstitute of Human Genetics, University of Regensburg, Regensburg, 93053, Germany. bweb@klinik.uni-regensburg.de.
Paul N BairdCentre for Eye Research, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Australia. pnb@unimelb.edu.au.
University of Melbourne · AUUniversity of Regensburg · DECentre for Eye Research Australia · AULeiden University Medical Center · NLUniversity of Tasmania · AU

Funding

International Advancing genomics through the AMD Genomics Consortium (IAMDGC)R01EY022310 · NEI · VANDERBILT UNIVERSITY · PI BLANTON, SUSAN HALLORAN, HAINES, JONATHAN L · 2012 to 2024
$4.9M
NEI NIH HHS EY022310NEI NIH HHS R01 EY022310NHGRI NIH HHS 1X01HG006934-01NHLBI NIH HHS HHSN268201200008CNHLBI NIH HHS HHSN268201200008IPHS HHS HHSN268201200008I
6 · The paper itself

Abstract

backgroundAge-related macular degeneration (AMD) is the leading cause of vision loss in Western societies with a strong genetic component. Candidate gene studies as well as genome-wide association studies strongly implicated genetic variations in complement genes to be involved in disease risk. So far, no association of AMD with complement component 4 (C4) was reported probably due to the complex nature of the C4 locus on chromosome 6.

methodsWe used multiplex ligation-dependent probe amplification (MLPA) to determine the copy number of the C4 gene as well as of both relevant isoforms, C4A and C4B, and assessed their association with AMD using logistic regression models.

resultsHere, we report on the analysis of 2645 individuals (1536 probands and 1109 unaffected controls), across three different centers, for multiallelic copy number variation (CNV) at the C4 locus. We find strong statistical significance for association of increased copy number of C4A (OR 0.81 (0.73; 0.89);P = 4.4 × 10(-5)), with the effect most pronounced in individuals over 78 years (OR 0.67 (0.55; 0.81)) and females (OR 0.77 (0.68; 0.87)). Furthermore, this association is independent of known AMD-associated risk variants in the nearby CFB/C2 locus, particularly in females and in individuals over 78 years.

conclusionsOur data strengthen the notion that complement dysregulation plays a crucial role in AMD etiology, an important finding for early intervention strategies and future therapeutics. In addition, for the first time, we provide evidence that multiallelic CNVs are associated with AMD pathology.

Indexed as

Gene DosageAllelesCohort StudiesComplement C4aFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansMacular DegenerationMaleMultiplex Polymerase Chain ReactionComplement C4aAge-related macular degenerationAMDC4ComplementCopy number variation (CNV)Genetic associationMultiallelic

Identifiers

PMID27090374
PMCPMC4835888
OpenAlexW2340123940

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.